STRINGSTRING
deoC deoC sbcD sbcD ESE88241.1 ESE88241.1 apt apt ESE87684.1 ESE87684.1 ESE87341.1 ESE87341.1 ESE86998.1 ESE86998.1 pdxY pdxY serS serS ESE86556.1 ESE86556.1 ESE86591.1 ESE86591.1 ESE86363.1 ESE86363.1 ESE86197.1 ESE86197.1 gpt gpt ESE87524.1 ESE87524.1 ESE87558.1 ESE87558.1 ESE81260.1 ESE81260.1 ESE81801.1 ESE81801.1 ESE81956.1 ESE81956.1 ESE82132.1 ESE82132.1 ESE82568.1 ESE82568.1 ESE82567.1 ESE82567.1 katE katE flgL flgL ESE83581.1 ESE83581.1 ESE83748.1 ESE83748.1 pgi pgi ESE84947.1 ESE84947.1 ESE84881.1 ESE84881.1 ESE84847.1 ESE84847.1 ESE85218.1 ESE85218.1 cdd cdd
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
deoCDeoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily. (259 aa)
sbcDExonuclease subunit SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (400 aa)
ESE88241.1COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1. (206 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (183 aa)
ESE87684.1Porin; COG3203 Outer membrane protein (porin). (377 aa)
ESE87341.1COG3203 Outer membrane protein (porin); Belongs to the Gram-negative porin family. (378 aa)
ESE86998.1COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1. (272 aa)
pdxYPyridoxamine kinase; Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP. (286 aa)
serSseryl-tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (430 aa)
ESE86556.1COG3203 Outer membrane protein (porin); Belongs to the Gram-negative porin family. (393 aa)
ESE86591.1COG1344 Flagellin and related hook-associated proteins. (108 aa)
ESE86363.1COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family. (219 aa)
ESE86197.1Hypothetical protein. (363 aa)
gptXanthine-guanine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily. (152 aa)
ESE87524.1COG3203 Outer membrane protein (porin); Belongs to the Gram-negative porin family. (350 aa)
ESE87558.1COG0113 Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (324 aa)
ESE81260.1Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (507 aa)
ESE81801.1beta-D-glucuronidase; COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (603 aa)
ESE81956.1COG3203 Outer membrane protein (porin). (383 aa)
ESE82132.1COG0033 Phosphoglucomutase. (546 aa)
ESE82568.1COG0670 Integral membrane protein, interacts with FtsH. (235 aa)
ESE82567.1COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family. (234 aa)
katEHydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide. (750 aa)
flgLCOG1344 Flagellin and related hook-associated proteins. (317 aa)
ESE83581.1COG1344 Flagellin and related hook-associated proteins. (349 aa)
ESE83748.1COG2259 Predicted membrane protein. (130 aa)
pgiCOG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family. (549 aa)
ESE84947.1COG3203 Outer membrane protein (porin); Belongs to the Gram-negative porin family. (250 aa)
ESE84881.1COG3203 Outer membrane protein (porin); Belongs to the Gram-negative porin family. (372 aa)
ESE84847.1COG3203 Outer membrane protein (porin); Belongs to the Gram-negative porin family. (359 aa)
ESE85218.1Type III secretion system needle complex protein PrgJ. (101 aa)
cddCytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. (294 aa)
Your Current Organism:
Salmonella enterica indica
NCBI taxonomy Id: 1173950
Other names: S. enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121, Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121
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