STRINGSTRING
pyrB pyrB AQG81695.1 AQG81695.1 carA carA AQG82163.1 AQG82163.1 AQG82212.1 AQG82212.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pyrBAspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (312 aa)
AQG81695.1Dihydroorotase; Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
carACarbamoyl-phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family. (367 aa)
AQG82163.1Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (958 aa)
AQG82212.1Dihydroorotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
Your Current Organism:
Spirosoma montaniterrae
NCBI taxonomy Id: 1178516
Other names: JCM 18492, KCTC 23999, KEMB 9004-162, KEMB:9004-162, S. montaniterrae, Spirosoma montaniterrae Lee et al. 2017, Spirosoma sp. DY10, strain DY10
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