Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQG78010.1 | AQG79246.1 | AWR27_00770 | AWR27_07855 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.530 |
| AQG78204.1 | AQG78857.1 | AWR27_01885 | AWR27_05675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the hyi family. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.507 |
| AQG78857.1 | AQG78204.1 | AWR27_05675 | AWR27_01885 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the hyi family. | 0.507 |
| AQG78857.1 | AQG79316.1 | AWR27_05675 | AWR27_08265 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.604 |
| AQG78857.1 | AQG79708.1 | AWR27_05675 | AWR27_10435 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.441 |
| AQG78857.1 | AQG81957.1 | AWR27_05675 | AWR27_23260 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
| AQG79246.1 | AQG78010.1 | AWR27_07855 | AWR27_00770 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.530 |
| AQG79316.1 | AQG78857.1 | AWR27_08265 | AWR27_05675 | AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.604 |
| AQG79316.1 | AQG79708.1 | AWR27_08265 | AWR27_10435 | AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
| AQG79316.1 | AQG81963.1 | AWR27_08265 | AWR27_23290 | AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.477 |
| AQG79708.1 | AQG78857.1 | AWR27_10435 | AWR27_05675 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.441 |
| AQG79708.1 | AQG79316.1 | AWR27_10435 | AWR27_08265 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
| AQG79708.1 | AQG79822.1 | AWR27_10435 | AWR27_11095 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.918 |
| AQG79708.1 | AQG80691.1 | AWR27_10435 | AWR27_15960 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.469 |
| AQG79708.1 | AQG81087.1 | AWR27_10435 | AWR27_18230 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AQG79822.1 | AQG79708.1 | AWR27_11095 | AWR27_10435 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.918 |
| AQG79822.1 | AQG81087.1 | AWR27_11095 | AWR27_18230 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
| AQG80425.1 | AQG80805.1 | AWR27_14490 | AWR27_16655 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family. | 0.467 |
| AQG80691.1 | AQG79708.1 | AWR27_15960 | AWR27_10435 | Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.469 |
| AQG80691.1 | AQG80805.1 | AWR27_15960 | AWR27_16655 | Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family. | 0.427 |
page 1 of 2