STRINGSTRING
BN6_02100 BN6_02100 BN6_73100 BN6_73100 rfbC3 rfbC3 BN6_78770 BN6_78770 nnrE nnrE BN6_01520 BN6_01520 BN6_59560 BN6_59560 sam32 sam32 sam21 sam21 rpe1 rpe1 dapF3 dapF3 alr alr BN6_25270 BN6_25270 rfbC1 rfbC1 wecB wecB murI murI dapF1 dapF1 rpe3 rpe3 BN6_17360 BN6_17360
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN6_02100NAD-dependent epimerase/dehydratase. (279 aa)
BN6_73100Methylmalonyl-CoA epimerase. (148 aa)
rfbC3dTDP-4-dehydrorhamnose 3,5-epimerase. (208 aa)
BN6_78770Hypothetical protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (370 aa)
nnrEHypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...] (466 aa)
BN6_01520Putative epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (365 aa)
BN6_59560Putative UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (370 aa)
sam32dTDP-4-dehydrorhamnose 3,5-epimerase. (207 aa)
sam21NDP-4-keto-6-deoxyhexose 4-ketoreductase. (326 aa)
rpe1Ribulose-phosphate 3-epimerase. (217 aa)
dapF3Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (280 aa)
alrAlanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (389 aa)
BN6_25270NAD-dependent epimerase/dehydratase. (333 aa)
rfbC1dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (200 aa)
wecBUDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (385 aa)
murIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (264 aa)
dapF1Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (266 aa)
rpe3Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (217 aa)
BN6_17360UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (321 aa)
Your Current Organism:
Saccharothrix espanaensis
NCBI taxonomy Id: 1179773
Other names: S. espanaensis DSM 44229, Saccharothrix espanaensis ATCC 51144, Saccharothrix espanaensis DSM 44229, Saccharothrix espanaensis NRRL 15764, Saccharothrix espanaensis str. DSM 44229, Saccharothrix espanaensis strain DSM 44229
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.