STRINGSTRING
BN6_48190 BN6_48190 coxS3 coxS3 relA relA BN6_16860 BN6_16860 BN6_11650 BN6_11650 engD engD coxS1 coxS1 BN6_04540 BN6_04540 BN6_05120 BN6_05120 sdhB sdhB BN6_72320 BN6_72320 BN6_44840 BN6_44840 paaE paaE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN6_48190(2Fe-2S)-binding domain protein. (167 aa)
coxS3Carbon-monoxide dehydrogenase small subunit. (155 aa)
relAPutative GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (766 aa)
BN6_16860Putative succinate dehydrogenase, iron-sulfur subunit. (249 aa)
BN6_11650Hypothetical protein. (90 aa)
engDGTP-dependent nucleic acid-binding protein engD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (386 aa)
coxS1Carbon-monoxide dehydrogenase small subunit. (182 aa)
BN6_04540Hypothetical protein. (66 aa)
BN6_05120Hypothetical protein. (84 aa)
sdhBSuccinate dehydrogenase, iron-sulfur subunit. (260 aa)
BN6_72320Fumarate reductase, iron-sulfur subunit. (248 aa)
BN6_44840Carbon-monoxide dehydrogenase. (173 aa)
paaEPutative phenylacetic acid degradation NADH oxidoreductase. (344 aa)
Your Current Organism:
Saccharothrix espanaensis
NCBI taxonomy Id: 1179773
Other names: S. espanaensis DSM 44229, Saccharothrix espanaensis ATCC 51144, Saccharothrix espanaensis DSM 44229, Saccharothrix espanaensis NRRL 15764, Saccharothrix espanaensis str. DSM 44229, Saccharothrix espanaensis strain DSM 44229
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