STRINGSTRING
pks4-1 pks4-1 pks4-2 pks4-2 pks4-3 pks4-3 pks6-1 pks6-1 pks6-2 pks6-2 pks8-4 pks8-4 pks8-2 pks8-2 pks8-1 pks8-1 pks9-3 pks9-3 pks9-2 pks9-2 pks9-1 pks9-1 pks9-7 pks9-7 pks9-6 pks9-6 pks9-5 pks9-5 pks9-4 pks9-4 pks10 pks10 pks11-3 pks11-3 pks11-2 pks11-2 pks11-1 pks11-1 pks13 pks13 pks14 pks14
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pks4-1Polyketide synthase. (2130 aa)
pks4-2Polyketide ketosynthase. (1960 aa)
pks4-3Polyketide synthase. (2420 aa)
pks6-1Putative iterative type I polyketide synthase. (1702 aa)
pks6-2Type I polyketide synthase like protein. (1903 aa)
pks8-4Modular polyketide synthase. (2230 aa)
pks8-2Polyketide synthase. (6706 aa)
pks8-1Polyketide synthase. (1999 aa)
pks9-3Polyketide synthase. (1844 aa)
pks9-2Polyketide synthase. (1549 aa)
pks9-1Polyketide synthase. (5549 aa)
pks9-7Polyketide synthase. (1984 aa)
pks9-6Polyketide synthase. (2743 aa)
pks9-5Polyketide synthase. (1589 aa)
pks9-4Polyketide synthase. (2646 aa)
pks10Putative polyketide synthase. (1394 aa)
pks11-3Putative polyketide synthase. (2069 aa)
pks11-2Putative polyketide synthase. (3151 aa)
pks11-1Polyketide synthase. (4248 aa)
pks13Polyketide synthase type I. (1807 aa)
pks14Polyketide synthase type I. (1463 aa)
Your Current Organism:
Saccharothrix espanaensis
NCBI taxonomy Id: 1179773
Other names: S. espanaensis DSM 44229, Saccharothrix espanaensis ATCC 51144, Saccharothrix espanaensis DSM 44229, Saccharothrix espanaensis NRRL 15764, Saccharothrix espanaensis str. DSM 44229, Saccharothrix espanaensis strain DSM 44229
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