(88 nodes) Mixed, incl. Type 1 protein exporter, and Domain of unknown function (DUF4135) network (Enterococcus rotai)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALS35913.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family. (117 aa)
	ALS35914.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (69 aa)
	ALS35915.1	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
	ALS35916.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (588 aa)
	ALS35917.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)
	ALS35918.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
	ALS35919.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0356 family. (70 aa)
	rnj	Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. (556 aa)
	ALS35933.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	ALS35934.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
	ALS35935.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
	ALS35936.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
	ALS35937.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
	ALS35938.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (65 aa)
	ALS35939.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)
	ALS35955.1	Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
	ALS35956.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (713 aa)
	ALS35957.1	Lantibiotic biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1036 aa)
	ALS35971.1	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase C1 family. (442 aa)
	ALS35972.1	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
	ALS35973.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
	ALS36022.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
	ALS36023.1	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
	ALS36024.1	DNA alkylation repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
	ALS36075.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
	ALS36145.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (202 aa)
	ALS36146.1	6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family. (474 aa)
	ALS36148.1	Transcriptional antiterminator; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
	ALS36150.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	ALS36151.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)
	ALS38735.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)
	ALS36402.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (60 aa)
	ALS36403.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (901 aa)
	ALS36404.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (711 aa)
	ALS36405.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	ALS36423.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	ALS36424.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
	ALS36425.1	Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
	ALS38749.1	M16 family metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
	mscL	Mechanosensitive ion channel protein MscL; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. (150 aa)
	ALS36570.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	ALS36594.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1427 aa)
	ALS36683.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (705 aa)
	rny	Ribonuclease Y; Endoribonuclease that initiates mRNA decay. (518 aa)
	ALS37032.1	6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family. (477 aa)
	ALS37033.1	Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
	ALS37034.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	ALS37035.1	CMP deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
	ALS37036.1	Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)
	ALS37037.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
	ALS37051.1	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
	ALS37052.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)
	ALS37053.1	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)
	ALS37141.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
	ALS37142.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
	ALS37143.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
	ALS37144.1	Lantibiotic biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (958 aa)
	ALS37231.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (587 aa)
	ALS37232.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)
	ALS37245.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (63 aa)
	ALS37246.1	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)
	ALS37247.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
	ALS37248.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
	ALS37249.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (725 aa)
	ALS37250.1	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	ALS37251.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (922 aa)
	ALS37252.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
	ALS37253.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)
	ALS37254.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
	ALS37255.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)
	ALS37256.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
	ALS37257.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)
	ALS37258.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (628 aa)
	ALS37698.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (583 aa)
	ALS37699.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)
	rnj-2	Zn-dependent hydrolase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. (562 aa)
	ALS38382.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)
	ALS38383.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (793 aa)
	ALS38384.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
	ALS38385.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (65 aa)
	ALS38386.1	Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
	ALS38387.1	Anaerobic sulfatase maturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
	ALS38388.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
	ALS38389.1	Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
	ALS38485.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (564 aa)
	ALS38486.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (97 aa)
	ALS38634.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (571 aa)
	ALS38635.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)

Your Current Organism:

Enterococcus rotai

NCBI taxonomy Id: 118060
Other names: CCM 4630, CCUG 61593, E. rotai, Enterococcus rotai Sedlacek et al. 2013, Enterococcus sp. CCM 4360, LMG 26678, LMG:26678

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALS35913.1	ALS35914.1	ATZ35_01700	ATZ35_01705	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.570
ALS35913.1	ALS35915.1	ATZ35_01700	ATZ35_01710	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
ALS35913.1	ALS35916.1	ATZ35_01700	ATZ35_01715	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423
ALS35913.1	ALS35917.1	ATZ35_01700	ATZ35_01720	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427
ALS35914.1	ALS35913.1	ATZ35_01705	ATZ35_01700	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.	0.570
ALS35914.1	ALS35915.1	ATZ35_01705	ATZ35_01710	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.456
ALS35915.1	ALS35913.1	ATZ35_01710	ATZ35_01700	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.	0.741
ALS35915.1	ALS35914.1	ATZ35_01710	ATZ35_01705	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.456
ALS35915.1	ALS35916.1	ATZ35_01710	ATZ35_01715	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
ALS35915.1	ALS35917.1	ATZ35_01710	ATZ35_01720	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
ALS35915.1	ALS35918.1	ATZ35_01710	ATZ35_01725	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
ALS35916.1	ALS35913.1	ATZ35_01715	ATZ35_01700	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.	0.423
ALS35916.1	ALS35915.1	ATZ35_01715	ATZ35_01710	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
ALS35916.1	ALS35917.1	ATZ35_01715	ATZ35_01720	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
ALS35916.1	ALS35918.1	ATZ35_01715	ATZ35_01725	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.621
ALS35916.1	ALS35936.1	ATZ35_01715	ATZ35_01820	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.533
ALS35916.1	ALS35956.1	ATZ35_01715	ATZ35_01930	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.665
ALS35916.1	ALS36023.1	ATZ35_01715	ATZ35_02265	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
ALS35916.1	ALS36151.1	ATZ35_01715	ATZ35_02930	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.614
ALS35916.1	ALS36404.1	ATZ35_01715	ATZ35_04275	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686