(7 nodes) Amino acid ABC transporter, permease protein, 3-TM domain network (Enterococcus rotai)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALS37075.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
	ALS37163.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (487 aa)
	ALS37528.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
	ALS36153.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
	ALS38162.1	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
	ALS38827.1	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
	ALS38676.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (717 aa)

Your Current Organism:

Enterococcus rotai

NCBI taxonomy Id: 118060
Other names: CCM 4630, CCUG 61593, E. rotai, Enterococcus rotai Sedlacek et al. 2013, Enterococcus sp. CCM 4360, LMG 26678, LMG:26678

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALS36153.1	ALS37075.1	ATZ35_02945	ATZ35_07865	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
ALS36153.1	ALS37163.1	ATZ35_02945	ATZ35_08320	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
ALS36153.1	ALS37528.1	ATZ35_02945	ATZ35_10300	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
ALS36153.1	ALS38162.1	ATZ35_02945	ATZ35_13695	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726
ALS36153.1	ALS38676.1	ATZ35_02945	ATZ35_16425	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ALS36153.1	ALS38827.1	ATZ35_02945	ATZ35_13700	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
ALS37075.1	ALS36153.1	ATZ35_07865	ATZ35_02945	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
ALS37075.1	ALS37163.1	ATZ35_07865	ATZ35_08320	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
ALS37075.1	ALS37528.1	ATZ35_07865	ATZ35_10300	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
ALS37075.1	ALS38162.1	ATZ35_07865	ATZ35_13695	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.479
ALS37075.1	ALS38676.1	ATZ35_07865	ATZ35_16425	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.861
ALS37075.1	ALS38827.1	ATZ35_07865	ATZ35_13700	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.515
ALS37163.1	ALS36153.1	ATZ35_08320	ATZ35_02945	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
ALS37163.1	ALS37075.1	ATZ35_08320	ATZ35_07865	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
ALS37163.1	ALS37528.1	ATZ35_08320	ATZ35_10300	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.747
ALS37163.1	ALS38162.1	ATZ35_08320	ATZ35_13695	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
ALS37163.1	ALS38676.1	ATZ35_08320	ATZ35_16425	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
ALS37163.1	ALS38827.1	ATZ35_08320	ATZ35_13700	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.722
ALS37528.1	ALS36153.1	ATZ35_10300	ATZ35_02945	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
ALS37528.1	ALS37075.1	ATZ35_10300	ATZ35_07865	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820