STRINGSTRING
mptE mptE bamB bamB ribK ribK pdtaS1 pdtaS1 MCBB_0117 MCBB_0117 tpiA tpiA pgk pgk MCBB_0286 MCBB_0286 gap gap rio1 rio1 nadK nadK yvkC yvkC ppsA1 ppsA1 pyrH pyrH apgM1 apgM1 prs prs MCBB_0481 MCBB_0481 MCBB_0501 MCBB_0501 MCBB_0610 MCBB_0610 pdtaS3 pdtaS3 MCBB_0628 MCBB_0628 pdtaS5 pdtaS5 ppsA3 ppsA3 mfnF mfnF MCBB_0706 MCBB_0706 aroK aroK lysC lysC MCBB_0772 MCBB_0772 pdtaS7 pdtaS7 MCBB_1015 MCBB_1015 apgM2 apgM2 MCBB_1082 MCBB_1082 MCBB_1112 MCBB_1112 argB argB pdtaS9 pdtaS9 msmS msmS MCBB_1337 MCBB_1337 mvk mvk eno eno cmk cmk adkA adkA pgk2 pgk2 pdtaS11 pdtaS11 MCBB_1562 MCBB_1562 pgk2-2 pgk2-2 ndk ndk MCBB_1627 MCBB_1627 aphA1 aphA1 phyR phyR MCBB_1724 MCBB_1724 tmk tmk MCBB_1745 MCBB_1745 tmk1 tmk1 pdtaS13 pdtaS13 MCBB_1861 MCBB_1861 mfnE mfnE pdtaS15 pdtaS15 MCBB_1878 MCBB_1878 ppsA5 ppsA5 aphA3 aphA3 thiL thiL MCBB_2255 MCBB_2255 MCBB_2309 MCBB_2309 pdtaS19 pdtaS19 MCBB_2337 MCBB_2337 MCBB_2353 MCBB_2353 MCBB_2365 MCBB_2365
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mptE6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6-hydroxymethyl- 7,8-dihydropterin diphosphate (6-HMDP); Belongs to the archaeal 6-HMPDK family. (250 aa)
bamB{ECO:0000255|HAMAP-Rule:MF_00923}; Part of the outer membrane protein assembly complex,which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Rule:MF_00923}. Rule:MF_00923}; Lipid-anchor Rule:MF_00923}; sp|E4PKG3|BAMB_MARAH;evalue=5e-015; PctID=32.10; score=82.8. (412 aa)
ribKRiboflavin kinase; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family. (125 aa)
pdtaS1Putative sensor histidine kinase pdtaS; Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR (By similarity). phospho-L-histidine; sp|P9WGL4|PDTAS_MYCTO,sp|P9WGL5|PDTAS_MYCTU; evalue=2e-021; PctID=33.33; score=105. (932 aa)
MCBB_0117Putative sugar kinase MTH_1544; sp|O27587|Y1544_METTH;evalue=1e-107; PctID=61.18; score=389; Belongs to the carbohydrate kinase PfkB family. (304 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (226 aa)
pgkPhosphoglycerate kinase; sp|P20972|PGK_METBR;evalue=9e-162; PctID=70.97; score=570; Belongs to the phosphoglycerate kinase family. (405 aa)
MCBB_0286Putative PAS/PAC sensor protein; tr|F6D3Z3|F6D3Z3_METPW;evalue=0.0; PctID=70.80; score=732; {ECO:0000313|EMBL:AEG19170,1}. (715 aa)
gapGlyceraldehyde-3-phosphate dehydrogenase; sp|P19314|G3P_METBR;evalue=1e-159; PctID=81.36; score=562. (338 aa)
rio1RIO-type serine/threonine-protein kinase Rio1; sp|Q57886|RIO1_METJA;evalue=3e-049; PctID=45.04; score=195. (258 aa)
nadKNAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. (283 aa)
yvkCPutative phosphotransferase YvkC; sp|O34796|YVKC_BACSU;evalue=2e-023; PctID=32.38; score=110. (543 aa)
ppsA1Putative phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate. phosphoenolpyruvate + phosphate. Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence=; the central domain the pyrophosphate/phosphate carrier histidine, and the C-terminal domain the pyruvate binding site. by a phosphocarrier histidine residue located on the surface of the central domain. The two first partial reactions are catalyzed at an active site located on the N-terminal domain, and the third partial reaction is catalyzed at an active site located on the C-terminal domain. For catal [...] (339 aa)
pyrHUridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. (225 aa)
apgM12,3-bisphosphoglycerate-independent phosphoglycerate mutase 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (403 aa)
prsRibose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P). (287 aa)
MCBB_0481Putative sugar kinase MTH_1544; sp|O27587|Y1544_METTH;evalue=9e-009; PctID=34.91; score=61.2. (309 aa)
MCBB_0501Phosphorylates (R)-pantoate to form (R)-4-phosphopantoate in the CoA biosynthesis pathway. phosphopantoate. Kinetic parameters: KM=0.47 mM for ATP; KM=1.2 mM for (R)-pantoate; KM=1.3 mM for (R)-pantothenate; Vmax=2870 nmol/min/mg enzyme with (R)-pantoate as substrate; Vmax=390 nmol/min/mg enzyme with (R)-pantothenate as substrate; phosphopantothenate; sp|Q5JHF1|POK_THEKO;evalue=5e-034; PctID=36.68; score=145. (295 aa)
MCBB_0610Adenylate kinase homolog MTH_1663; sp|O27699|KADL_METTH;evalue=8e-038; PctID=45.93; score=156. (181 aa)
pdtaS3Putative sensor histidine kinase pdtaS; Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR (By similarity). phospho-L-histidine; sp|P9WGL4|PDTAS_MYCTO,sp|P9WGL5|PDTAS_MYCTU; evalue=2e-018; PctID=28.02; score=93.2. (331 aa)
MCBB_0628Signal transduction histidine kinase; tr|F0T978|F0T978_METLA;evalue=7e-106; PctID=60.21; score=391; {ECO:0000313|EMBL:ADZ08700,1}. (572 aa)
pdtaS5Putative sensor histidine kinase pdtaS; Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR (By similarity). phospho-L-histidine; sp|P9WGL4|PDTAS_MYCTO,sp|P9WGL5|PDTAS_MYCTU; evalue=4e-017; PctID=31.94; score=91.3. (991 aa)
ppsA3Putative phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate. phosphoenolpyruvate + phosphate. Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence=; the central domain the pyrophosphate/phosphate carrier histidine, and the C-terminal domain the pyruvate binding site. by a phosphocarrier histidine residue located on the surface of the central domain. The two first partial reactions are catalyzed at an active site located on the N-terminal domain, and the third partial reaction is catalyzed at an active site located on the C-terminal domain. For catal [...] (413 aa)
mfnF4-[[4-(2-aminoethyl)phenoxy]-methyl]-2- furanmethanamine-glutamate synthase; Catalyzes the condensation between 5-(aminomethyl)-3-furanmethanol diphosphate (F1-PP) and gamma-glutamyltyramine to produce APMF-Glu. furanmethanol diphosphate = 4-[[4-(2-aminoethyl)phenoxy]-methyl]-2-furanmethanamine- glutamate + diphosphate; sp|Q58250|MFNF_METJA;evalue=9e-051; PctID=38.24; score=201; {ECO:0000305}. (341 aa)
MCBB_0706Beta-ribofuranosylaminobenzene 5'-phosphate synthase; Catalyzes the condensation of 4-aminobenzoate (pABA) with 5- phospho-alpha-D-ribose 1-diphosphate (PRPP) to produce beta- ribofuranosylaminobenzene 5'-phosphate (beta-RFA-P). (330 aa)
aroKShikimate kinase; sp|O26896|AROK_METTH;evalue=3e-052; PctID=53.76; score=205. (310 aa)
lysCAspartokinase; Catalyzes the phosphorylation of the beta-carboxyl group of aspartic acid with ATP to yield 4-phospho-L-aspartate, which is involved in the branched biosynthetic pathway leading to the biosynthesis of amino acids threonine, isoleucine and methionine. aspartate. pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 1/4. novo pathway; L-homoserine from L-aspartate: step 1/3. threonine from L-aspartate: step 1/5. regulation) and of a homodimer of 2 isoforms Beta (regulation). Event=Alternative initiation; Named isoforms=2; Name=Alpha; Synonyms=Aspartokinase 2 subunit a [...] (406 aa)
MCBB_0772Putative LRR receptor-like serine/threonine-protein kinase At1g06840; sp|C0LGD7|Y1684_ARATH;evalue=2e-014; PctID=31.48; score=82.0. (746 aa)
pdtaS7Putative sensor histidine kinase pdtaS; Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR (By similarity). phospho-L-histidine; sp|P9WGL4|PDTAS_MYCTO,sp|P9WGL5|PDTAS_MYCTU; evalue=7e-024; PctID=30.45; score=113. (814 aa)
MCBB_1015Putative sugar kinase AF_0356; sp|O29891|Y356_ARCFU;evalue=9e-028; PctID=48.23; score=124; Belongs to the carbohydrate kinase PfkB family. (312 aa)
apgM22,3-bisphosphoglycerate-independent phosphoglycerate mutase 2; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (401 aa)
MCBB_1082UPF0200 protein; sp|P58833|Y1294_PYRFU;evalue=3e-036; PctID=48.37; score=151; Belongs to the UPF0200 family. (194 aa)
MCBB_1112Putative protein MJ0227; sp|Q57680|Y227_METJA;evalue=3e-037; PctID=44.54; score=155. (304 aa)
argBPutative acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (293 aa)
pdtaS9Putative sensor histidine kinase pdtaS; Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR (By similarity). phospho-L-histidine; sp|P9WGL4|PDTAS_MYCTO,sp|P9WGL5|PDTAS_MYCTU; evalue=2e-020; PctID=32.98; score=102. (750 aa)
msmSHeme-binding sensor kinase component part of a two-component regulatory system involved in methyl sulfide metabolism. Does not act as a phytochrome-like photoreceptor. phospho-L-histidine. Name=heme; Xref=ChEBI:CHEBI:30413; Evidence=; Note=Heme-binding is redox-active and coordinates various ligands such as imidazole, dimethyl sulfide, and carbon monoxide depending on the redox state. The redox state of the heme cofactor influences on autophosphorylation activity: while reduced protein does not autophosphorylate, oxidized protein promotes autophosphorylation signal; redox state of heme [...] (751 aa)
MCBB_1337Isopentenyl phosphate kinase; Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids. (270 aa)
mvkMevalonate kinase; Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)- mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids; Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (324 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (418 aa)
cmkCytidylate kinase; sp|A5UL61|KCY_METS3;evalue=2e-048; PctID=58.71; score=191; {ECO:0000255|HAMAP-Rule:MF_00239}. (176 aa)
adkAAdenylate kinase; sp|O26135|KADA_METTH;evalue=3e-074; PctID=72.97; score=277; Belongs to the archaeal adenylate kinase family. (185 aa)
pgk22-phosphoglycerate kinase; sp|O27911|PGK2_METTH;evalue=3e-128; PctID=81.52; score=457; {ECO:0000255|HAMAP-Rule:MF_00769}. (305 aa)
pdtaS11Putative sensor histidine kinase pdtaS; Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR (By similarity). phospho-L-histidine; sp|P9WGL4|PDTAS_MYCTO,sp|P9WGL5|PDTAS_MYCTU; evalue=1e-016; PctID=28.40; score=89.0. (673 aa)
MCBB_1562Putative sugar kinase MTH_1544; sp|O27587|Y1544_METTH;evalue=8e-017; PctID=24.82; score=87.8; Belongs to the carbohydrate kinase PfkB family. (283 aa)
pgk2-22-phosphoglycerate kinase; sp|Q58877|PGK2_METJA;evalue=2e-037; PctID=44.34; score=156; {ECO:0000255|HAMAP-Rule:MF_00769}. (322 aa)
ndkNucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. (145 aa)
MCBB_1627UPF0218 protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA). (169 aa)
aphA1Cyanobacterial phytochrome A; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. phospho-L-histidine. family; sp|Q9LCC2|PHYA_NOSS1;evalue=2e-065; PctID=52.65; score=250. (536 aa)
phyRPhyllosphere-induced regulator PhyR; Key regulator for adaptation to epiphytic life (leaf colonizing) of the bacterium. Positively regulates several genes including katE, sodA, hsp20, dps and gloA. However,it is not known whether this regulation is direct or indirect. Also induces several dehydrogenases. is the same as in the wild-type strain when plant colonization is mimicked in vitro in the presence of succinate and methanol. However, in planta colonization experiments show a severe growth defect of the phyR deletion mutant. Sequence=ACS40857.1; Type=Erroneous initiation; Evidence=; [...] (121 aa)
MCBB_1724Putative adenylate kinase; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily. (186 aa)
tmkPutative thymidylate kinase; sp|O27793|KTHY_METTH;evalue=3e-056; PctID=56.32; score=218. (191 aa)
MCBB_1745Putative protein; tr|U6EEU2|U6EEU2_9EURY;evalue=2e-072; PctID=63.43; score=278; {ECO:0000313|EMBL:CDG65599,1}. (217 aa)
tmk1Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis. Rule:MF_00165}; sp|A5IN77|KTHY_THEP1;evalue=1e-009; PctID=29.95; score=63.2; {ECO:0000255|HAMAP-Rule:MF_00165}. (187 aa)
pdtaS13Putative sensor histidine kinase pdtaS; Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR (By similarity). phospho-L-histidine; sp|P9WGL4|PDTAS_MYCTO,sp|P9WGL5|PDTAS_MYCTU; evalue=6e-021; PctID=33.18; score=102. (562 aa)
MCBB_1861Putative protein MJ0781; sp|Q58191|Y781_METJA;evalue=5e-065; PctID=46.39; score=249. (540 aa)
mfnECatalyzes the formation of 5-(aminomethyl)-3-furanmethanol diphosphate (F1-PP) from 5-(aminomethyl)-3-furanmethanol phosphate (F1-P) and ATP. In vitro, can also act as an adenylate kinase that catalyzes the transfer of a phosphoryl group from ATP to AMP, generating two molecules of ADP. ATP = 5-(aminomethyl)-3-furanmethanol diphosphate + ADP. Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence=; Kinetic parameters: KM=10.2 uM for ATP; KM=26.2 uM for AMP; Vmax=3.1 umol/min/mg enzyme for the adenylate kinase reaction (at 37 degrees Celsius); pH dependence: Optimum pH is 7.0; sp|Q57900|MFNE_MET [...] (214 aa)
pdtaS15Putative sensor histidine kinase pdtaS; Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR (By similarity). phospho-L-histidine; sp|P9WGL4|PDTAS_MYCTO,sp|P9WGL5|PDTAS_MYCTU; evalue=1e-016; PctID=30.43; score=87.8. (373 aa)
MCBB_1878Lactaldehyde dehydrogenase; Involved in F420 biosynthesis through the oxidation of lactaldehyde to lactate. lactate + NADH; sp|Q6LX65|LADH_METMP;evalue=2e-117; PctID=46.48; score=423. (468 aa)
ppsA5Putative phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (765 aa)
aphA3Cyanobacterial phytochrome A; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. phospho-L-histidine. family; sp|Q9LCC2|PHYA_NOSS1;evalue=3e-037; PctID=36.96; score=157. (761 aa)
thiLThiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. (373 aa)
MCBB_2255Dolichol kinase; tr|K6TP16|K6TP16_9EURY;evalue=9e-066; PctID=65.59; score=255; {ECO:0000313|EMBL:EKQ53705,1}. (186 aa)
MCBB_2309Putative GAF sensor protein; tr|F6D6G4|F6D6G4_METPW;evalue=1e-061; PctID=61.50; score=241; {ECO:0000313|EMBL:AEG19397,1}. (187 aa)
pdtaS19Putative sensor histidine kinase pdtaS; Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR (By similarity). phospho-L-histidine; sp|P9WGL4|PDTAS_MYCTO,sp|P9WGL5|PDTAS_MYCTU; evalue=3e-019; PctID=31.67; score=97.1. (570 aa)
MCBB_2337Putative bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the N-terminal section; belongs to the KAE1 / Tsa [...] (546 aa)
MCBB_2353PAS domain S-box; tr|K6U9S1|K6U9S1_9EURY;evalue=5e-069; PctID=43.84; score=269; {ECO:0000313|EMBL:EKQ54049,1}. (756 aa)
MCBB_2365Putative protein sll1770; sp|P73627|Y1770_SYNY3;evalue=1e-066; PctID=35.25; score=254. (562 aa)
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
Server load: low (18%) [HD]