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MCBB_2092 MCBB_2092 phyR phyR HK1 HK1 pdtaR5 pdtaR5 pdtaR3 pdtaR3 MCBB_0916 MCBB_0916 pdtaS5 pdtaS5 pdtaR1 pdtaR1 pdtaR7 pdtaR7 pdtaS17 pdtaS17
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
MCBB_2092Putative protein MTH_1235; sp|O27303|Y1235_METTH;evalue=2e-057; PctID=53.21; score=221. (218 aa)
phyRPhyllosphere-induced regulator PhyR; Key regulator for adaptation to epiphytic life (leaf colonizing) of the bacterium. Positively regulates several genes including katE, sodA, hsp20, dps and gloA. However,it is not known whether this regulation is direct or indirect. Also induces several dehydrogenases. is the same as in the wild-type strain when plant colonization is mimicked in vitro in the presence of succinate and methanol. However, in planta colonization experiments show a severe growth defect of the phyR deletion mutant. Sequence=ACS40857.1; Type=Erroneous initiation; Evidence=; [...] (121 aa)
HK1Putative histidine kinase 1; Cytokinin receptor related to bacterial two-component regulators. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade. phospho-L-histidine. an active histidine that mediates the phosphotransfer. between a His in the transmitter domain and an Asp of the receiver domain. Sequence=BAD37425.1; Type=Erroneous gene model prediction; Evidence=; Sequence=BAD37547.1; Type=Erroneous gene model prediction; Evidence=; Sequence=BAF20158.1; Type=Erroneous gene model prediction; Evidence=; sp|A2YFR6|OHK1_ORYSI,sp|A3BE68|OHK1_ORYSJ; [...] (140 aa)
pdtaR5Putative transcriptional regulatory protein pdtaR; Member of the two-component regulatory system pdtaR/pdtaS. (Potential). ProRule:PRU00308}. Sequence=AAK45932.1; Type=Erroneous initiation; Evidence=; sp|P9WGM2|PDTAR_MYCTO,sp|P9WGM3|PDTAR_MYCTU; evalue=4e-011; PctID=31.90; score=68.9. (280 aa)
pdtaR3Putative transcriptional regulatory protein pdtaR; Member of the two-component regulatory system pdtaR/pdtaS. (Potential). ProRule:PRU00308}. Sequence=AAK45932.1; Type=Erroneous initiation; Evidence=; sp|P9WGM2|PDTAR_MYCTO,sp|P9WGM3|PDTAR_MYCTU; evalue=9e-016; PctID=31.88; score=85.1. (418 aa)
MCBB_0916Signal transduction histidine kinase; tr|F0T830|F0T830_METLA;evalue=1e-132; PctID=47.90; score=480; {ECO:0000313|EMBL:ADZ09656,1}. (583 aa)
pdtaS5Putative sensor histidine kinase pdtaS; Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR (By similarity). phospho-L-histidine; sp|P9WGL4|PDTAS_MYCTO,sp|P9WGL5|PDTAS_MYCTU; evalue=4e-017; PctID=31.94; score=91.3. (991 aa)
pdtaR1Putative transcriptional regulatory protein pdtaR; Member of the two-component regulatory system pdtaR/pdtaS. (Potential). ProRule:PRU00308}. Sequence=AAK45932.1; Type=Erroneous initiation; Evidence=; sp|P9WGM2|PDTAR_MYCTO,sp|P9WGM3|PDTAR_MYCTU; evalue=1e-011; PctID=35.64; score=70.1. (250 aa)
pdtaR7Putative transcriptional regulatory protein pdtaR; Member of the two-component regulatory system pdtaR/pdtaS. (Potential). ProRule:PRU00308}. Sequence=AAK45932.1; Type=Erroneous initiation; Evidence=; sp|P9WGM2|PDTAR_MYCTO,sp|P9WGM3|PDTAR_MYCTU; evalue=1e-014; PctID=35.77; score=83.2. (1022 aa)
pdtaS17Putative sensor histidine kinase pdtaS; Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR (By similarity). phospho-L-histidine; sp|P9WGL4|PDTAS_MYCTO,sp|P9WGL5|PDTAS_MYCTU; evalue=2e-023; PctID=33.02; score=110. (471 aa)
Your Current Organism:
Methanobacterium congolense
NCBI taxonomy Id: 118062
Other names: DSM 7095, M. congolense, Methanobacterium congolense Cuzin et al. 2001, OCM 786, strain C
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