(14 nodes) Proteasome assembly network (Picoides pubescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N307_02927	OTU domain-containing protein 6B. (274 aa)
	N307_05599	Proteasome assembly chaperone 1. (137 aa)
	N307_14237	Proteasome assembly chaperone 3. (122 aa)
	N307_12662	Proteasomal ubiquitin receptor ADRM1. (409 aa)
	N307_12281	Proteasome-associated protein ECM29. (1828 aa)
	N307_04806	Proteasome assembly chaperone 4. (52 aa)
	N307_14362	26S proteasome non-ATPase regulatory subunit 10. (183 aa)
	N307_14878	Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1. Belongs to the PSMG2 family. (268 aa)
	N307_00901	26S proteasome non-ATPase regulatory subunit 9. (175 aa)
	N307_04865	26S proteasome non-ATPase regulatory subunit 5. (481 aa)
	N307_10989	26S proteasome complex subunit DSS1. (36 aa)
	N307_02951	26S proteasome non-ATPase regulatory subunit 11. (76 aa)
	N307_06452	Proteasomal ATPase-associated factor 1. (392 aa)
	N307_02347	Proteasome maturation protein. (140 aa)

Your Current Organism:

Picoides pubescens

NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N307_00901	N307_02951	A0A093H6N6	A0A093GRC5	26S proteasome non-ATPase regulatory subunit 9.	26S proteasome non-ATPase regulatory subunit 11.	0.914
N307_00901	N307_04865	A0A093H6N6	A0A093GSZ7	26S proteasome non-ATPase regulatory subunit 9.	26S proteasome non-ATPase regulatory subunit 5.	0.843
N307_00901	N307_06452	A0A093H6N6	A0A093GQX2	26S proteasome non-ATPase regulatory subunit 9.	Proteasomal ATPase-associated factor 1.	0.845
N307_00901	N307_12281	A0A093H6N6	A0A093GHA3	26S proteasome non-ATPase regulatory subunit 9.	Proteasome-associated protein ECM29.	0.442
N307_00901	N307_12662	A0A093H6N6	A0A093G6W6	26S proteasome non-ATPase regulatory subunit 9.	Proteasomal ubiquitin receptor ADRM1.	0.867
N307_00901	N307_14362	A0A093H6N6	A0A093GJ60	26S proteasome non-ATPase regulatory subunit 9.	26S proteasome non-ATPase regulatory subunit 10.	0.911
N307_02347	N307_02951	A0A093GQQ7	A0A093GRC5	Proteasome maturation protein.	26S proteasome non-ATPase regulatory subunit 11.	0.527
N307_02347	N307_04806	A0A093GQQ7	A0A093GHY1	Proteasome maturation protein.	Proteasome assembly chaperone 4.	0.680
N307_02347	N307_05599	A0A093GQQ7	A0A093IXJ7	Proteasome maturation protein.	Proteasome assembly chaperone 1.	0.763
N307_02347	N307_06452	A0A093GQQ7	A0A093GQX2	Proteasome maturation protein.	Proteasomal ATPase-associated factor 1.	0.512
N307_02347	N307_10989	A0A093GQQ7	A0A093GSR4	Proteasome maturation protein.	26S proteasome complex subunit DSS1.	0.424
N307_02347	N307_12281	A0A093GQQ7	A0A093GHA3	Proteasome maturation protein.	Proteasome-associated protein ECM29.	0.625
N307_02347	N307_12662	A0A093GQQ7	A0A093G6W6	Proteasome maturation protein.	Proteasomal ubiquitin receptor ADRM1.	0.515
N307_02347	N307_14237	A0A093GQQ7	A0A093FZN7	Proteasome maturation protein.	Proteasome assembly chaperone 3.	0.671
N307_02347	N307_14362	A0A093GQQ7	A0A093GJ60	Proteasome maturation protein.	26S proteasome non-ATPase regulatory subunit 10.	0.515
N307_02347	N307_14878	A0A093GQQ7	A0A093I6V6	Proteasome maturation protein.	Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1. Belongs to the PSMG2 family.	0.980
N307_02951	N307_00901	A0A093GRC5	A0A093H6N6	26S proteasome non-ATPase regulatory subunit 11.	26S proteasome non-ATPase regulatory subunit 9.	0.914
N307_02951	N307_02347	A0A093GRC5	A0A093GQQ7	26S proteasome non-ATPase regulatory subunit 11.	Proteasome maturation protein.	0.527
N307_02951	N307_04865	A0A093GRC5	A0A093GSZ7	26S proteasome non-ATPase regulatory subunit 11.	26S proteasome non-ATPase regulatory subunit 5.	0.956
N307_02951	N307_06452	A0A093GRC5	A0A093GQX2	26S proteasome non-ATPase regulatory subunit 11.	Proteasomal ATPase-associated factor 1.	0.823