(16 nodes) Endoplasmic reticulum exit site network (Picoides pubescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	N307_04574	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family. (160 aa)
	N307_15123	Protein transport protein Sec24D. (1036 aa)
	N307_10164	Leucine-rich repeat serine/threonine-protein kinase 2. (2451 aa)
	N307_10072	GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family. (179 aa)
	N307_06592	Protein TFG. (355 aa)
	N307_10269	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (700 aa)
	N307_10073	Protein transport protein Sec24A. (1064 aa)
	N307_14043	Protein transport protein Sec31A. (1221 aa)
	N307_06097	Protein transport protein Sec31B. (1201 aa)
	N307_06067	Protein transport protein Sec24C. (894 aa)
	N307_09008	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
	N307_05795	Prolactin regulatory element-binding protein. (372 aa)
	N307_06785	Protein transport protein Sec24B. (1194 aa)
	N307_14888	Metallophosphoesterase 1. (361 aa)
	N307_10413	Melanoma inhibitory activity protein 3. (1900 aa)
	N307_02939	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (900 aa)

Your Current Organism:

Picoides pubescens

NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N307_02939	N307_04574	A0A093GLD3	A0A093GG77	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	0.906
N307_02939	N307_05795	A0A093GLD3	A0A093IVZ3	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Prolactin regulatory element-binding protein.	0.713
N307_02939	N307_06067	A0A093GLD3	A0A093GE21	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec24C.	0.989
N307_02939	N307_06097	A0A093GLD3	A0A093GE48	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec31B.	0.933
N307_02939	N307_06592	A0A093GLD3	A0A093FWB6	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein TFG.	0.855
N307_02939	N307_06785	A0A093GLD3	A0A093IPL6	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec24B.	0.976
N307_02939	N307_09008	A0A093GLD3	A0A093IZB3	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.973
N307_02939	N307_10072	A0A093GLD3	A0A093G3B6	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.	0.906
N307_02939	N307_10073	A0A093GLD3	A0A093FTM7	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec24A.	0.976
N307_02939	N307_10269	A0A093GLD3	A0A093FVX6	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.973
N307_02939	N307_10413	A0A093GLD3	A0A093GLP1	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Melanoma inhibitory activity protein 3.	0.661
N307_02939	N307_14043	A0A093GLD3	A0A093GF87	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec31A.	0.933
N307_02939	N307_15123	A0A093GLD3	A0A093GAU9	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec24D.	0.978
N307_04574	N307_02939	A0A093GG77	A0A093GLD3	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	0.906
N307_04574	N307_05795	A0A093GG77	A0A093IVZ3	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	Prolactin regulatory element-binding protein.	0.969
N307_04574	N307_06067	A0A093GG77	A0A093GE21	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein Sec24C.	0.708
N307_04574	N307_06097	A0A093GG77	A0A093GE48	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein Sec31B.	0.944
N307_04574	N307_06592	A0A093GG77	A0A093FWB6	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	Protein TFG.	0.656
N307_04574	N307_06785	A0A093GG77	A0A093IPL6	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein Sec24B.	0.905
N307_04574	N307_09008	A0A093GG77	A0A093IZB3	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.931