STRINGSTRING
N307_00856 N307_00856 N307_13508 N307_13508 N307_04727 N307_04727 N307_14362 N307_14362 N307_02232 N307_02232 N307_02227 N307_02227 N307_08447 N307_08447 N307_13823 N307_13823 N307_00719 N307_00719 N307_05231 N307_05231 N307_05762 N307_05762 N307_06398 N307_06398 N307_07244 N307_07244 N307_00886 N307_00886 N307_04576 N307_04576 N307_06961 N307_06961 N307_12667 N307_12667 N307_10583 N307_10583 N307_05404 N307_05404 N307_04589 N307_04589 N307_07331 N307_07331
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N307_00856Polyubiquitin-C. (156 aa)
N307_13508Proteasome subunit alpha type. (260 aa)
N307_04727Cell division cycle protein 20. (505 aa)
N307_1436226S proteasome non-ATPase regulatory subunit 10. (183 aa)
N307_02232Proteasome activator complex subunit 4. (1821 aa)
N307_02227Ubiquitin-40S ribosomal protein S27a. (157 aa)
N307_0844726S protease regulatory subunit 4; Belongs to the AAA ATPase family. (439 aa)
N307_13823Securin. (192 aa)
N307_00719Cell division cycle protein 23. (584 aa)
N307_0523126S proteasome non-ATPase regulatory subunit 1. (952 aa)
N307_05762KxDL motif-containing protein 1. (175 aa)
N307_06398Transmembrane 7 superfamily member 3. (548 aa)
N307_07244Cell division cycle protein 16. (623 aa)
N307_00886Anaphase-promoting complex subunit 7. (565 aa)
N307_04576Anaphase-promoting complex subunit 16. (110 aa)
N307_06961Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (185 aa)
N307_12667Proteasome subunit alpha type. (247 aa)
N307_10583Anaphase-promoting complex subunit 2; Belongs to the cullin family. (783 aa)
N307_05404Cell division cycle protein 27. (822 aa)
N307_04589Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (126 aa)
N307_07331Polyubiquitin-B. (229 aa)
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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