STRINGSTRING
N307_00263 N307_00263 N307_01175 N307_01175 N307_07769 N307_07769 N307_06681 N307_06681 N307_04334 N307_04334 N307_07123 N307_07123 N307_12879 N307_12879 N307_15137 N307_15137 N307_07870 N307_07870 N307_07888 N307_07888 N307_13234 N307_13234 N307_13137 N307_13137 N307_14964 N307_14964 N307_10583 N307_10583 N307_11980 N307_11980 N307_06733 N307_06733 N307_12667 N307_12667 N307_10175 N307_10175 N307_14959 N307_14959 N307_10929 N307_10929 N307_05546 N307_05546 N307_14113 N307_14113 N307_06720 N307_06720 N307_06746 N307_06746 N307_06757 N307_06757 N307_09351 N307_09351 N307_08292 N307_08292 N307_06961 N307_06961 N307_14986 N307_14986 N307_02943 N307_02943 N307_07605 N307_07605 N307_06729 N307_06729 N307_06751 N307_06751 N307_06761 N307_06761 N307_10217 N307_10217 N307_06721 N307_06721 N307_07244 N307_07244 N307_06722 N307_06722 N307_06737 N307_06737 N307_06753 N307_06753 N307_04576 N307_04576 N307_04589 N307_04589 N307_07331 N307_07331 N307_02227 N307_02227 N307_02232 N307_02232 N307_05263 N307_05263 N307_12369 N307_12369 N307_10980 N307_10980 N307_05703 N307_05703 N307_12916 N307_12916 N307_10901 N307_10901 N307_03412 N307_03412 N307_14362 N307_14362 N307_03599 N307_03599 N307_02294 N307_02294 N307_11154 N307_11154 N307_00667 N307_00667 N307_01203 N307_01203 N307_05079 N307_05079 N307_06189 N307_06189 N307_00719 N307_00719 N307_00790 N307_00790 N307_12810 N307_12810 N307_11628 N307_11628 N307_13842 N307_13842 N307_13390 N307_13390 N307_05231 N307_05231 N307_07375 N307_07375 N307_09659 N307_09659 N307_09653 N307_09653 N307_05163 N307_05163 N307_06192 N307_06192 N307_02841 N307_02841 N307_05762 N307_05762 N307_09069 N307_09069 N307_06755 N307_06755 N307_06750 N307_06750 N307_06744 N307_06744 N307_06725 N307_06725 N307_06734 N307_06734 N307_06728 N307_06728 N307_10567 N307_10567 N307_06398 N307_06398 N307_07181 N307_07181 N307_01330 N307_01330 N307_07652 N307_07652 N307_00886 N307_00886 N307_00856 N307_00856 N307_05821 N307_05821 N307_01017 N307_01017 N307_08485 N307_08485 N307_00901 N307_00901 N307_14617 N307_14617 N307_04894 N307_04894 N307_12944 N307_12944 N307_15065 N307_15065 N307_09041 N307_09041 N307_04272 N307_04272 N307_11237 N307_11237 N307_13479 N307_13479 N307_06247 N307_06247 N307_14657 N307_14657 N307_01355 N307_01355 N307_12697 N307_12697 N307_13508 N307_13508 N307_12738 N307_12738 N307_08447 N307_08447 N307_03668 N307_03668 N307_03648 N307_03648 N307_04865 N307_04865 N307_01050 N307_01050 N307_05278 N307_05278 N307_09764 N307_09764 N307_04996 N307_04996 N307_02951 N307_02951 N307_14414 N307_14414 N307_11416 N307_11416 N307_10068 N307_10068 N307_06907 N307_06907 N307_00187 N307_00187 N307_01161 N307_01161 N307_05404 N307_05404
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N307_00263DNA polymerase delta subunit 3. (419 aa)
N307_01175DNA helicase; Belongs to the MCM family. (890 aa)
N307_07769Origin recognition complex subunit 2. (564 aa)
N307_06681Replication factor C subunit 1. (1157 aa)
N307_0433426S proteasome non-ATPase regulatory subunit 14. (310 aa)
N307_07123Replication protein A 32 kDa subunit. (269 aa)
N307_12879Importin subunit alpha-6. (539 aa)
N307_15137Cyclin-A2; Belongs to the cyclin family. (301 aa)
N307_07870DNA replication complex GINS protein PSF1. (168 aa)
N307_07888DNA helicase MCM8; Belongs to the MCM family. (760 aa)
N307_13234Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
N307_13137Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. (283 aa)
N307_14964Proteasome subunit beta type-4. (213 aa)
N307_10583Anaphase-promoting complex subunit 2; Belongs to the cullin family. (783 aa)
N307_11980Fizzy-related protein. (487 aa)
N307_06733Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (60 aa)
N307_12667Proteasome subunit alpha type. (247 aa)
N307_10175Histone H2B; Belongs to the histone H2B family. (126 aa)
N307_14959Importin subunit alpha; Belongs to the importin alpha family. (538 aa)
N307_1092926S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (388 aa)
N307_05546Proteasome activator complex subunit 3. (242 aa)
N307_14113Cell division control protein 45. (566 aa)
N307_06720Histone H2A; Belongs to the histone H2A family. (129 aa)
N307_06746Histone H2A; Belongs to the histone H2A family. (129 aa)
N307_06757Histone H2A; Belongs to the histone H2A family. (83 aa)
N307_09351Protein MCM10. (860 aa)
N307_08292Replication factor C subunit 2. (316 aa)
N307_06961Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (185 aa)
N307_1498626S proteasome non-ATPase regulatory subunit 13. (351 aa)
N307_02943DNA replication complex GINS protein PSF3. (162 aa)
N307_07605DNA replication complex GINS protein SLD5. (192 aa)
N307_06729Histone H2B; Belongs to the histone H2B family. (126 aa)
N307_06751Histone H2A; Belongs to the histone H2A family. (116 aa)
N307_06761Histone H2B; Belongs to the histone H2B family. (126 aa)
N307_10217Proteasome subunit alpha type. (246 aa)
N307_06721Histone H2B; Belongs to the histone H2B family. (126 aa)
N307_07244Cell division cycle protein 16. (623 aa)
N307_06722Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
N307_06737Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
N307_06753Histone H2A; Belongs to the histone H2A family. (88 aa)
N307_04576Anaphase-promoting complex subunit 16. (110 aa)
N307_04589Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (126 aa)
N307_07331Polyubiquitin-B. (229 aa)
N307_02227Ubiquitin-40S ribosomal protein S27a. (157 aa)
N307_02232Proteasome activator complex subunit 4. (1821 aa)
N307_0526326S proteasome non-ATPase regulatory subunit 2. (863 aa)
N307_12369Proteasome subunit beta type-3. (142 aa)
N307_10980Replication protein A 14 kDa subunit. (116 aa)
N307_05703Transmembrane 4 L6 family member 1. (220 aa)
N307_1291626S proteasome non-ATPase regulatory subunit 12. (456 aa)
N307_10901DNA polymerase epsilon subunit 2. (503 aa)
N307_03412Origin recognition complex subunit 3. (686 aa)
N307_1436226S proteasome non-ATPase regulatory subunit 10. (183 aa)
N307_0359926S proteasome non-ATPase regulatory subunit 7. (298 aa)
N307_02294DNA helicase; Belongs to the MCM family. (838 aa)
N307_11154Proteasome subunit alpha type. (261 aa)
N307_00667DNA polymerase. (1405 aa)
N307_0120326S proteasome non-ATPase regulatory subunit 4. (270 aa)
N307_05079RING-box protein 1. (78 aa)
N307_06189Origin recognition complex subunit 5. (432 aa)
N307_00719Cell division cycle protein 23. (584 aa)
N307_00790Proteasome endopeptidase complex. (225 aa)
N307_12810DNA helicase MCM9; Belongs to the MCM family. (1141 aa)
N307_11628Protein DBF4 A. (679 aa)
N307_13842DNA primase small subunit. (268 aa)
N307_13390DNA helicase; Belongs to the MCM family. (792 aa)
N307_0523126S proteasome non-ATPase regulatory subunit 1. (952 aa)
N307_07375Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (604 aa)
N307_09659Replication factor C subunit 3. (327 aa)
N307_09653Cyclin-A1; Belongs to the cyclin family. (317 aa)
N307_05163DNA helicase; Belongs to the MCM family. (734 aa)
N307_0619226S protease regulatory subunit 7; Belongs to the AAA ATPase family. (411 aa)
N307_02841Proteasome inhibitor PI31 subunit. (229 aa)
N307_05762KxDL motif-containing protein 1. (175 aa)
N307_09069Histone H2B type 1-F/J/L; Belongs to the histone H2B family. (98 aa)
N307_06755Histone H2B 5; Belongs to the histone H2B family. (126 aa)
N307_06750Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (74 aa)
N307_06744Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
N307_06725Histone H3; Belongs to the histone H3 family. (136 aa)
N307_06734Histone H2A; Belongs to the histone H2A family. (129 aa)
N307_06728Histone H2A; Belongs to the histone H2A family. (129 aa)
N307_10567DNA polymerase epsilon subunit 3. (121 aa)
N307_06398Transmembrane 7 superfamily member 3. (548 aa)
N307_07181ATPase family AAA domain-containing protein 5. (1779 aa)
N307_01330RCC1 and BTB domain-containing protein 1. (531 aa)
N307_07652Meiosis-specific with OB domain-containing protein. (469 aa)
N307_00886Anaphase-promoting complex subunit 7. (565 aa)
N307_00856Polyubiquitin-C. (156 aa)
N307_05821Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (83 aa)
N307_01017Replication factor C subunit 5. (318 aa)
N307_08485Proteasome subunit alpha type. (234 aa)
N307_0090126S proteasome non-ATPase regulatory subunit 9. (175 aa)
N307_14617Proteasome subunit beta. (181 aa)
N307_04894Proteasome subunit beta type-7. (225 aa)
N307_12944G1/S-specific cyclin-E1; Belongs to the cyclin family. (346 aa)
N307_15065Origin recognition complex subunit 6. (257 aa)
N307_09041Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (857 aa)
N307_04272Proteasome subunit beta. (237 aa)
N307_11237RCC1 and BTB domain-containing protein 2. (531 aa)
N307_1347926S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (413 aa)
N307_06247DNA polymerase delta subunit 2. (385 aa)
N307_14657Importin subunit alpha-7. (535 aa)
N307_01355Histone H2A; Belongs to the histone H2A family. (128 aa)
N307_12697DNA primase large subunit. (501 aa)
N307_13508Proteasome subunit alpha type. (260 aa)
N307_12738Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (96 aa)
N307_0844726S protease regulatory subunit 4; Belongs to the AAA ATPase family. (439 aa)
N307_03668DNA replication complex GINS protein PSF2. (71 aa)
N307_03648DNA replication factor Cdt1. (293 aa)
N307_0486526S proteasome non-ATPase regulatory subunit 5. (481 aa)
N307_0105026S proteasome non-ATPase regulatory subunit 6. (343 aa)
N307_05278Replication factor C subunit 4. (364 aa)
N307_09764S-phase kinase-associated protein 2. (419 aa)
N307_04996Histone H2A; Belongs to the histone H2A family. (116 aa)
N307_0295126S proteasome non-ATPase regulatory subunit 11. (76 aa)
N307_14414G1/S-specific cyclin-E2; Belongs to the cyclin family. (399 aa)
N307_11416Geminin. (185 aa)
N307_10068S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
N307_0690726S proteasome non-ATPase regulatory subunit 3. (296 aa)
N307_00187Cell division cycle 7-related protein kinase. (519 aa)
N307_01161Histone H2A; Belongs to the histone H2A family. (79 aa)
N307_05404Cell division cycle protein 27. (822 aa)
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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