22 items (Capronia coronata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O1_08893	Uncharacterized protein. (263 aa)
	A1O1_09164	Uncharacterized protein. (1812 aa)
	A1O1_08894	Uncharacterized protein. (274 aa)
	A1O1_08678	Brix domain-containing protein. (448 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (459 aa)
	A1O1_08035	Uncharacterized protein. (741 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (832 aa)
	A1O1_08437	Protein MAK16; Belongs to the MAK16 family. (321 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (787 aa)
	A1O1_06296	Large subunit ribosomal protein L35e. (127 aa)
	A1O1_06441	RRM domain-containing protein. (742 aa)
	A1O1_04545	ATP-dependent RNA helicase dbp9. (609 aa)
	A1O1_05201	Valyl-tRNA synthetase. (386 aa)
	A1O1_04232	CP-type G domain-containing protein. (551 aa)
	A1O1_02848	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (430 aa)
	A1O1_02938	Uncharacterized protein. (1203 aa)
	A1O1_04336	60S ribosomal protein L7. (218 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (669 aa)
	A1O1_01727	Uncharacterized protein. (347 aa)
	A1O1_01728	Brix domain-containing protein. (336 aa)
	A1O1_04461	RAI1 domain-containing protein. (399 aa)
	A1O1_02432	HIT-type domain-containing protein. (375 aa)

Your Current Organism:

Capronia coronata

NCBI taxonomy Id: 1182541
Other names: C. coronata CBS 617.96, Capronia coronata CBS 617.96

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O1_01727	A1O1_01728	W9YUJ8	W9YVR5	Uncharacterized protein.	Brix domain-containing protein.	0.537
A1O1_01727	A1O1_02848	W9YUJ8	W9YNH1	Uncharacterized protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.687
A1O1_01727	A1O1_02938	W9YUJ8	W9YNN8	Uncharacterized protein.	Uncharacterized protein.	0.490
A1O1_01727	A1O1_04232	W9YUJ8	W9YN62	Uncharacterized protein.	CP-type G domain-containing protein.	0.976
A1O1_01727	A1O1_04336	W9YUJ8	W9YPQ1	Uncharacterized protein.	60S ribosomal protein L7.	0.935
A1O1_01727	A1O1_04545	W9YUJ8	W9YFY3	Uncharacterized protein.	ATP-dependent RNA helicase dbp9.	0.890
A1O1_01727	A1O1_05201	W9YUJ8	W9YG78	Uncharacterized protein.	Valyl-tRNA synthetase.	0.957
A1O1_01727	A1O1_06296	W9YUJ8	W9XZG8	Uncharacterized protein.	Large subunit ribosomal protein L35e.	0.810
A1O1_01727	A1O1_06441	W9YUJ8	W9XZT4	Uncharacterized protein.	RRM domain-containing protein.	0.987
A1O1_01727	A1O1_08035	W9YUJ8	W9XP40	Uncharacterized protein.	Uncharacterized protein.	0.908
A1O1_01727	A1O1_08437	W9YUJ8	W9XSH7	Uncharacterized protein.	Protein MAK16; Belongs to the MAK16 family.	0.973
A1O1_01727	A1O1_08678	W9YUJ8	W9XJ38	Uncharacterized protein.	Brix domain-containing protein.	0.985
A1O1_01727	A1O1_09164	W9YUJ8	W9XE73	Uncharacterized protein.	Uncharacterized protein.	0.926
A1O1_01727	ERB1	W9YUJ8	W9XZ00	Uncharacterized protein.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.978
A1O1_01727	NOP7	W9YUJ8	W9YTD8	Uncharacterized protein.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.962
A1O1_01727	SPB1	W9YUJ8	W9XPK5	Uncharacterized protein.	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.925
A1O1_01727	YTM1	W9YUJ8	W9XMG3	Uncharacterized protein.	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.982
A1O1_01728	A1O1_01727	W9YVR5	W9YUJ8	Brix domain-containing protein.	Uncharacterized protein.	0.537
A1O1_01728	A1O1_02848	W9YVR5	W9YNH1	Brix domain-containing protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.687
A1O1_01728	A1O1_02938	W9YVR5	W9YNN8	Brix domain-containing protein.	Uncharacterized protein.	0.490