STRINGSTRING
A1O1_01728 A1O1_01728 A1O1_08893 A1O1_08893 A1O1_09099 A1O1_09099 A1O1_09164 A1O1_09164 A1O1_08894 A1O1_08894 A1O1_09004 A1O1_09004 A1O1_08678 A1O1_08678 A1O1_08805 A1O1_08805 YTM1 YTM1 A1O1_07837 A1O1_07837 A1O1_08110 A1O1_08110 A1O1_07808 A1O1_07808 A1O1_08137 A1O1_08137 A1O1_08202 A1O1_08202 SPB1 SPB1 A1O1_08437 A1O1_08437 A1O1_07281 A1O1_07281 A1O1_07307 A1O1_07307 A1O1_08135 A1O1_08135 A1O1_06130 A1O1_06130 ERB1 ERB1 A1O1_06431 A1O1_06431 A1O1_06577 A1O1_06577 A1O1_06272 A1O1_06272 A1O1_06870 A1O1_06870 A1O1_05045 A1O1_05045 A1O1_05106 A1O1_05106 A1O1_04805 A1O1_04805 A1O1_04835 A1O1_04835 A1O1_04945 A1O1_04945 A1O1_05498 A1O1_05498 A1O1_05740 A1O1_05740 A1O1_06450 A1O1_06450 A1O1_03351 A1O1_03351 A1O1_03891 A1O1_03891 A1O1_04044 A1O1_04044 A1O1_03782 A1O1_03782 A1O1_04777 A1O1_04777 A1O1_03984 A1O1_03984 A1O1_04397 A1O1_04397 A1O1_05023 A1O1_05023 A1O1_04672 A1O1_04672 A1O1_04544 A1O1_04544 A1O1_04353 A1O1_04353 NAT10 NAT10 A1O1_03389 A1O1_03389 A1O1_06717 A1O1_06717 A1O1_02125 A1O1_02125 A1O1_06903 A1O1_06903 A1O1_02390 A1O1_02390 A1O1_04232 A1O1_04232 A1O1_07365 A1O1_07365 A1O1_07472 A1O1_07472 A1O1_04467 A1O1_04467 A1O1_00357 A1O1_00357 A1O1_00222 A1O1_00222 A1O1_00227 A1O1_00227 A1O1_00774 A1O1_00774 A1O1_00504 A1O1_00504 A1O1_01183 A1O1_01183 A1O1_05813 A1O1_05813 A1O1_00857 A1O1_00857 NOP7 NOP7 A1O1_06147 A1O1_06147 A1O1_01727 A1O1_01727 A1O1_01384 A1O1_01384 A1O1_01852 A1O1_01852 A1O1_01439 A1O1_01439 A1O1_01484 A1O1_01484 A1O1_01668 A1O1_01668 A1O1_02583 A1O1_02583 A1O1_02724 A1O1_02724 A1O1_02519 A1O1_02519 A1O1_03041 A1O1_03041 A1O1_02987 A1O1_02987 A1O1_03264 A1O1_03264 A1O1_00356 A1O1_00356 A1O1_01187 A1O1_01187 A1O1_01372 A1O1_01372 A1O1_04096 A1O1_04096 A1O1_02117 A1O1_02117 A1O1_02372 A1O1_02372 A1O1_00812 A1O1_00812 A1O1_01240 A1O1_01240
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O1_01728Brix domain-containing protein. (336 aa)
A1O1_08893Uncharacterized protein. (263 aa)
A1O1_0909940S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (261 aa)
A1O1_09164Uncharacterized protein. (1812 aa)
A1O1_08894Uncharacterized protein. (274 aa)
A1O1_09004Atypical/RIO/RIO2 protein kinase. (383 aa)
A1O1_08678Brix domain-containing protein. (448 aa)
A1O1_08805Ribosome biogenesis protein n. (261 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (459 aa)
A1O1_07837WD_REPEATS_REGION domain-containing protein. (555 aa)
A1O1_08110Kri1_C domain-containing protein. (600 aa)
A1O1_07808Bms1-type G domain-containing protein. (805 aa)
A1O1_08137U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (729 aa)
A1O1_08202Uncharacterized protein. (262 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (832 aa)
A1O1_08437Protein MAK16; Belongs to the MAK16 family. (321 aa)
A1O1_07281WD_REPEATS_REGION domain-containing protein. (980 aa)
A1O1_07307Uncharacterized protein. (708 aa)
A1O1_08135Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (276 aa)
A1O1_06130Uncharacterized protein. (364 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (787 aa)
A1O1_06431CPL domain-containing protein. (690 aa)
A1O1_06577Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A1O1_06272Uncharacterized protein. (763 aa)
A1O1_06870Uncharacterized protein. (387 aa)
A1O1_05045Sas10 domain-containing protein. (640 aa)
A1O1_05106Uncharacterized protein. (912 aa)
A1O1_04805Uncharacterized protein. (412 aa)
A1O1_04835ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family. (478 aa)
A1O1_04945WD_REPEATS_REGION domain-containing protein. (502 aa)
A1O1_05498S4 RNA-binding domain-containing protein. (188 aa)
A1O1_05740Uncharacterized protein. (802 aa)
A1O1_06450Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (465 aa)
A1O1_0335118S rRNA biogenesis protein RCL1. (405 aa)
A1O1_03891rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (399 aa)
A1O1_04044Uncharacterized protein. (524 aa)
A1O1_03782Uncharacterized protein. (933 aa)
A1O1_04777Brix domain-containing protein. (445 aa)
A1O1_03984NUC153 domain-containing protein. (727 aa)
A1O1_04397BUD22 domain-containing protein. (435 aa)
A1O1_05023U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (277 aa)
A1O1_04672Nucleolar protein 58. (630 aa)
A1O1_04544WD_REPEATS_REGION domain-containing protein. (594 aa)
A1O1_04353Uncharacterized protein. (1028 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1114 aa)
A1O1_03389Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
A1O1_06717CBF domain-containing protein. (286 aa)
A1O1_02125Nop domain-containing protein. (517 aa)
A1O1_06903Uncharacterized protein. (298 aa)
A1O1_02390WD_REPEATS_REGION domain-containing protein. (888 aa)
A1O1_04232CP-type G domain-containing protein. (551 aa)
A1O1_07365Uncharacterized protein. (1284 aa)
A1O1_07472Uncharacterized protein. (481 aa)
A1O1_04467DRIM domain-containing protein. (2594 aa)
A1O1_00357Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (683 aa)
A1O1_00222Uncharacterized protein. (769 aa)
A1O1_00227rRNA 2'-O-methyltransferase fibrillarin. (247 aa)
A1O1_00774Bms1-type G domain-containing protein. (1184 aa)
A1O1_00504Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4851 aa)
A1O1_01183WD_REPEATS_REGION domain-containing protein. (602 aa)
A1O1_0581340S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
A1O1_00857HMG box domain-containing protein. (289 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (669 aa)
A1O1_06147Uncharacterized protein. (395 aa)
A1O1_01727Uncharacterized protein. (347 aa)
A1O1_01384Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (223 aa)
A1O1_0185220S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (440 aa)
A1O1_01439Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (592 aa)
A1O1_0148440S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (262 aa)
A1O1_01668Brix domain-containing protein. (296 aa)
A1O1_02583Uncharacterized protein. (394 aa)
A1O1_02724RNA helicase. (892 aa)
A1O1_02519Uncharacterized protein. (324 aa)
A1O1_03041C2H2-type domain-containing protein. (129 aa)
A1O1_02987HAD_SAK_1 domain-containing protein. (585 aa)
A1O1_03264WD_REPEATS_REGION domain-containing protein. (536 aa)
A1O1_0035660S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
A1O1_01187WD_REPEATS_REGION domain-containing protein. (937 aa)
A1O1_01372rRNA-processing protein FCF1. (195 aa)
A1O1_04096WD_REPEATS_REGION domain-containing protein. (969 aa)
A1O1_02117KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (336 aa)
A1O1_02372Uncharacterized protein. (279 aa)
A1O1_00812U3 small nucleolar RNA-associated protein 22. (1141 aa)
A1O1_01240WD_REPEATS_REGION domain-containing protein. (991 aa)
Your Current Organism:
Capronia coronata
NCBI taxonomy Id: 1182541
Other names: C. coronata CBS 617.96, Capronia coronata CBS 617.96
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