STRINGSTRING
A1O1_00060 A1O1_00060 A1O1_00489 A1O1_00489 A1O1_00504 A1O1_00504 NOP7 NOP7 A1O1_01139 A1O1_01139 A1O1_01727 A1O1_01727 A1O1_01384 A1O1_01384 A1O1_01728 A1O1_01728 A1O1_02328 A1O1_02328 A1O1_02583 A1O1_02583 A1O1_02831 A1O1_02831 A1O1_00356 A1O1_00356 A1O1_05189 A1O1_05189 A1O1_00804 A1O1_00804 A1O1_01222 A1O1_01222 A1O1_04461 A1O1_04461 A1O1_02372 A1O1_02372 A1O1_02432 A1O1_02432 A1O1_00167 A1O1_00167 SPB1 SPB1 A1O1_08437 A1O1_08437 A1O1_07510 A1O1_07510 A1O1_07307 A1O1_07307 A1O1_07650 A1O1_07650 A1O1_08027 A1O1_08027 A1O1_08177 A1O1_08177 ERB1 ERB1 A1O1_06296 A1O1_06296 A1O1_08893 A1O1_08893 A1O1_09164 A1O1_09164 A1O1_06431 A1O1_06431 A1O1_06441 A1O1_06441 A1O1_06693 A1O1_06693 A1O1_06272 A1O1_06272 A1O1_08894 A1O1_08894 A1O1_08678 A1O1_08678 A1O1_08623 A1O1_08623 A1O1_08805 A1O1_08805 YTM1 YTM1 A1O1_07708 A1O1_07708 A1O1_09072 A1O1_09072 A1O1_08035 A1O1_08035 A1O1_06870 A1O1_06870 A1O1_07473 A1O1_07473 A1O1_05740 A1O1_05740 A1O1_09241 A1O1_09241 A1O1_06305 A1O1_06305 A1O1_04777 A1O1_04777 TIF6 TIF6 A1O1_04545 A1O1_04545 A1O1_05201 A1O1_05201 A1O1_05099 A1O1_05099 A1O1_03389 A1O1_03389 A1O1_03395 A1O1_03395 A1O1_03492 A1O1_03492 A1O1_02696 A1O1_02696 A1O1_04232 A1O1_04232 A1O1_02848 A1O1_02848 A1O1_07456 A1O1_07456 A1O1_02938 A1O1_02938 A1O1_02978 A1O1_02978 A1O1_04228 A1O1_04228 A1O1_04336 A1O1_04336
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O1_00060Large subunit ribosomal protein L14e. (152 aa)
A1O1_0048960S ribosomal protein L10-A. (223 aa)
A1O1_00504Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4851 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (669 aa)
A1O1_01139WD_REPEATS_REGION domain-containing protein. (525 aa)
A1O1_01727Uncharacterized protein. (347 aa)
A1O1_01384Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (223 aa)
A1O1_01728Brix domain-containing protein. (336 aa)
A1O1_02328SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (703 aa)
A1O1_02583Uncharacterized protein. (394 aa)
A1O1_02831Exonuclease domain-containing protein. (310 aa)
A1O1_0035660S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
A1O1_0518960S ribosomal protein L33-B. (109 aa)
A1O1_00804Uncharacterized protein. (537 aa)
A1O1_01222Uncharacterized protein. (446 aa)
A1O1_04461RAI1 domain-containing protein. (399 aa)
A1O1_02372Uncharacterized protein. (279 aa)
A1O1_02432HIT-type domain-containing protein. (375 aa)
A1O1_00167Large subunit ribosomal protein L7Ae. (288 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (832 aa)
A1O1_08437Protein MAK16; Belongs to the MAK16 family. (321 aa)
A1O1_07510Uncharacterized protein. (463 aa)
A1O1_07307Uncharacterized protein. (708 aa)
A1O1_0765060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (314 aa)
A1O1_08027Large subunit ribosomal protein L24e. (198 aa)
A1O1_08177Translation initiation factor RLI1. (603 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (787 aa)
A1O1_06296Large subunit ribosomal protein L35e. (127 aa)
A1O1_08893Uncharacterized protein. (263 aa)
A1O1_09164Uncharacterized protein. (1812 aa)
A1O1_06431CPL domain-containing protein. (690 aa)
A1O1_06441RRM domain-containing protein. (742 aa)
A1O1_0669360S ribosomal protein L5. (301 aa)
A1O1_06272Uncharacterized protein. (763 aa)
A1O1_08894Uncharacterized protein. (274 aa)
A1O1_08678Brix domain-containing protein. (448 aa)
A1O1_08623Uncharacterized protein. (198 aa)
A1O1_08805Ribosome biogenesis protein n. (261 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (459 aa)
A1O1_07708Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (287 aa)
A1O1_09072Uncharacterized protein. (133 aa)
A1O1_08035Uncharacterized protein. (741 aa)
A1O1_06870Uncharacterized protein. (387 aa)
A1O1_07473CP-type G domain-containing protein. (697 aa)
A1O1_05740Uncharacterized protein. (802 aa)
A1O1_09241Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (248 aa)
A1O1_06305Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
A1O1_04777Brix domain-containing protein. (445 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (248 aa)
A1O1_04545ATP-dependent RNA helicase dbp9. (609 aa)
A1O1_05201Valyl-tRNA synthetase. (386 aa)
A1O1_05099Uncharacterized protein. (413 aa)
A1O1_03389Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
A1O1_03395Uncharacterized protein. (712 aa)
A1O1_03492Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (759 aa)
A1O1_0269650S ribosomal protein L24. (132 aa)
A1O1_04232CP-type G domain-containing protein. (551 aa)
A1O1_02848Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (430 aa)
A1O1_07456Large subunit ribosomal protein L23Ae. (154 aa)
A1O1_02938Uncharacterized protein. (1203 aa)
A1O1_02978Uncharacterized protein. (584 aa)
A1O1_0422860S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
A1O1_0433660S ribosomal protein L7. (218 aa)
Your Current Organism:
Capronia coronata
NCBI taxonomy Id: 1182541
Other names: C. coronata CBS 617.96, Capronia coronata CBS 617.96
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