STRINGSTRING
A1O1_05364 A1O1_05364 A1O1_05419 A1O1_05419 A1O1_01121 A1O1_01121 A1O1_01132 A1O1_01132 A1O1_01187 A1O1_01187 A1O1_01262 A1O1_01262 A1O1_01372 A1O1_01372 A1O1_01587 A1O1_01587 A1O1_01602 A1O1_01602 A1O1_03490 A1O1_03490 A1O1_04035 A1O1_04035 A1O1_04096 A1O1_04096 A1O1_04369 A1O1_04369 A1O1_02117 A1O1_02117 A1O1_03061 A1O1_03061 A1O1_03081 A1O1_03081 A1O1_00037 A1O1_00037 A1O1_00812 A1O1_00812 A1O1_01240 A1O1_01240 A1O1_01610 A1O1_01610 A1O1_07808 A1O1_07808 A1O1_08015 A1O1_08015 A1O1_08035 A1O1_08035 A1O1_08137 A1O1_08137 A1O1_09248 A1O1_09248 A1O1_08202 A1O1_08202 SPB1 SPB1 A1O1_06705 A1O1_06705 A1O1_06772 A1O1_06772 A1O1_07220 A1O1_07220 A1O1_06917 A1O1_06917 A1O1_07281 A1O1_07281 RPS1 RPS1 A1O1_07500 A1O1_07500 A1O1_08500 A1O1_08500 A1O1_07811 A1O1_07811 A1O1_07816 A1O1_07816 A1O1_05876 A1O1_05876 A1O1_05712 A1O1_05712 ERB1 ERB1 A1O1_06281 A1O1_06281 A1O1_06577 A1O1_06577 A1O1_06442 A1O1_06442 A1O1_06704 A1O1_06704 A1O1_06920 A1O1_06920 A1O1_07397 A1O1_07397 A1O1_07039 A1O1_07039 A1O1_07433 A1O1_07433 A1O1_05045 A1O1_05045 A1O1_05106 A1O1_05106 A1O1_04805 A1O1_04805 A1O1_04835 A1O1_04835 A1O1_04945 A1O1_04945 A1O1_05498 A1O1_05498 A1O1_05830 A1O1_05830 A1O1_06224 A1O1_06224 A1O1_09076 A1O1_09076 A1O1_06280 A1O1_06280 A1O1_03351 A1O1_03351 A1O1_03372 A1O1_03372 A1O1_08446 A1O1_08446 A1O1_04615 A1O1_04615 A1O1_04044 A1O1_04044 A1O1_08559 A1O1_08559 A1O1_03782 A1O1_03782 A1O1_03948 A1O1_03948 A1O1_04367 A1O1_04367 A1O1_05023 A1O1_05023 A1O1_04672 A1O1_04672 A1O1_05135 A1O1_05135 A1O1_04544 A1O1_04544 A1O1_08893 A1O1_08893 A1O1_09099 A1O1_09099 A1O1_09164 A1O1_09164 A1O1_08894 A1O1_08894 A1O1_08999 A1O1_08999 A1O1_09004 A1O1_09004 A1O1_08465 A1O1_08465 A1O1_08627 A1O1_08627 YTM1 YTM1 A1O1_07837 A1O1_07837 A1O1_04353 A1O1_04353 A1O1_08006 A1O1_08006 A1O1_08112 A1O1_08112 A1O1_01869 A1O1_01869 A1O1_03578 A1O1_03578 A1O1_06717 A1O1_06717 A1O1_02125 A1O1_02125 A1O1_01870 A1O1_01870 A1O1_06903 A1O1_06903 A1O1_02390 A1O1_02390 A1O1_07263 A1O1_07263 A1O1_04232 A1O1_04232 A1O1_07365 A1O1_07365 A1O1_03850 A1O1_03850 A1O1_02506 A1O1_02506 A1O1_07441 A1O1_07441 A1O1_07472 A1O1_07472 A1O1_04467 A1O1_04467 A1O1_00036 A1O1_00036 A1O1_00227 A1O1_00227 A1O1_00237 A1O1_00237 A1O1_00774 A1O1_00774 A1O1_01027 A1O1_01027 A1O1_01183 A1O1_01183 A1O1_05813 A1O1_05813 A1O1_05853 A1O1_05853 NOP7 NOP7 A1O1_06147 A1O1_06147 A1O1_06203 A1O1_06203 A1O1_01369 A1O1_01369 A1O1_01394 A1O1_01394 A1O1_01852 A1O1_01852 A1O1_01484 A1O1_01484 A1O1_01514 A1O1_01514 A1O1_06549 A1O1_06549 A1O1_01544 A1O1_01544 A1O1_06639 A1O1_06639 A1O1_01668 A1O1_01668 A1O1_02583 A1O1_02583 A1O1_02831 A1O1_02831 A1O1_03011 A1O1_03011 A1O1_02937 A1O1_02937 A1O1_00098 A1O1_00098 A1O1_00173 A1O1_00173 A1O1_00183 A1O1_00183 A1O1_03184 A1O1_03184 A1O1_03264 A1O1_03264 RPS0 RPS0 A1O1_05102 A1O1_05102 A1O1_00356 A1O1_00356 A1O1_05234 A1O1_05234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O1_0536440S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
A1O1_05419Uncharacterized protein. (257 aa)
A1O1_01121Uncharacterized protein. (486 aa)
A1O1_01132Uncharacterized protein; Belongs to the DEAD box helicase family. (531 aa)
A1O1_01187WD_REPEATS_REGION domain-containing protein. (937 aa)
A1O1_0126230S ribosomal protein S8. (170 aa)
A1O1_01372rRNA-processing protein FCF1. (195 aa)
A1O1_01587Uncharacterized protein. (350 aa)
A1O1_01602Uncharacterized protein. (219 aa)
A1O1_0349040S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (215 aa)
A1O1_04035Exosome complex component RRP45. (291 aa)
A1O1_04096WD_REPEATS_REGION domain-containing protein. (969 aa)
A1O1_0436940S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
A1O1_02117KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (336 aa)
A1O1_0306140S ribosomal protein S19. (142 aa)
A1O1_0308140S ribosomal protein S20. (116 aa)
A1O1_0003740S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
A1O1_00812U3 small nucleolar RNA-associated protein 22. (1141 aa)
A1O1_01240WD_REPEATS_REGION domain-containing protein. (991 aa)
A1O1_0161030S ribosomal protein S13p/S18e; Belongs to the universal ribosomal protein uS13 family. (118 aa)
A1O1_07808Bms1-type G domain-containing protein. (805 aa)
A1O1_08015WD_REPEATS_REGION domain-containing protein. (534 aa)
A1O1_08035Uncharacterized protein. (741 aa)
A1O1_08137U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (729 aa)
A1O1_09248Uncharacterized protein. (210 aa)
A1O1_08202Uncharacterized protein. (262 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (832 aa)
A1O1_06705Small subunit ribosomal protein S10e. (181 aa)
A1O1_06772RNase_PH domain-containing protein. (259 aa)
A1O1_0722040S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
A1O1_06917RNase_PH domain-containing protein. (258 aa)
A1O1_07281WD_REPEATS_REGION domain-containing protein. (980 aa)
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (257 aa)
A1O1_07500RIX1 domain-containing protein. (789 aa)
A1O1_08500Ribosomal protein L28e. (152 aa)
A1O1_07811Utp12 domain-containing protein. (911 aa)
A1O1_07816Uncharacterized protein. (338 aa)
A1O1_05876Uncharacterized protein. (596 aa)
A1O1_05712S4 RNA-binding domain-containing protein. (451 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (787 aa)
A1O1_06281Uncharacterized protein. (1074 aa)
A1O1_06577Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A1O1_06442Uncharacterized protein. (417 aa)
A1O1_0670440S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (203 aa)
A1O1_0692060S ribosomal protein L34-B. (117 aa)
A1O1_0739740S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (146 aa)
A1O1_07039BP28CT domain-containing protein. (1868 aa)
A1O1_07433Uncharacterized protein. (181 aa)
A1O1_05045Sas10 domain-containing protein. (640 aa)
A1O1_05106Uncharacterized protein. (912 aa)
A1O1_04805Uncharacterized protein. (412 aa)
A1O1_04835ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family. (478 aa)
A1O1_04945WD_REPEATS_REGION domain-containing protein. (502 aa)
A1O1_05498S4 RNA-binding domain-containing protein. (188 aa)
A1O1_0583040S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (193 aa)
A1O1_0622440S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (155 aa)
A1O1_0907640S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (162 aa)
A1O1_06280Uncharacterized protein; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (304 aa)
A1O1_0335118S rRNA biogenesis protein RCL1. (405 aa)
A1O1_0337240S ribosomal protein S17. (150 aa)
A1O1_08446Ipi1_N domain-containing protein. (335 aa)
A1O1_046155'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1062 aa)
A1O1_04044Uncharacterized protein. (524 aa)
A1O1_0855960S ribosomal protein L2. (254 aa)
A1O1_03782Uncharacterized protein. (933 aa)
A1O1_03948RNase_PH domain-containing protein. (381 aa)
A1O1_0436740S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
A1O1_05023U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (277 aa)
A1O1_04672Nucleolar protein 58. (630 aa)
A1O1_05135Ribonuclease P/MRP protein subunit RPP1. (387 aa)
A1O1_04544WD_REPEATS_REGION domain-containing protein. (594 aa)
A1O1_08893Uncharacterized protein. (263 aa)
A1O1_0909940S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (261 aa)
A1O1_09164Uncharacterized protein. (1812 aa)
A1O1_08894Uncharacterized protein. (274 aa)
A1O1_08999RNase_PH domain-containing protein. (310 aa)
A1O1_09004Atypical/RIO/RIO2 protein kinase. (383 aa)
A1O1_08465ULP_PROTEASE domain-containing protein. (968 aa)
A1O1_08627Uncharacterized protein. (307 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (459 aa)
A1O1_07837WD_REPEATS_REGION domain-containing protein. (555 aa)
A1O1_04353Uncharacterized protein. (1028 aa)
A1O1_08006CK1/CK1/CK1-D protein kinase; Belongs to the protein kinase superfamily. (372 aa)
A1O1_08112Uncharacterized protein. (305 aa)
A1O1_01869Uncharacterized protein. (474 aa)
A1O1_03578RNase_PH domain-containing protein. (370 aa)
A1O1_06717CBF domain-containing protein. (286 aa)
A1O1_02125Nop domain-containing protein. (517 aa)
A1O1_01870ULP_PROTEASE domain-containing protein. (798 aa)
A1O1_06903Uncharacterized protein. (298 aa)
A1O1_02390WD_REPEATS_REGION domain-containing protein. (888 aa)
A1O1_07263Uncharacterized protein. (103 aa)
A1O1_04232CP-type G domain-containing protein. (551 aa)
A1O1_07365Uncharacterized protein. (1284 aa)
A1O1_03850Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (602 aa)
A1O1_02506Uncharacterized protein. (199 aa)
A1O1_07441U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (752 aa)
A1O1_07472Uncharacterized protein. (481 aa)
A1O1_04467DRIM domain-containing protein. (2594 aa)
A1O1_0003640S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (98 aa)
A1O1_00227rRNA 2'-O-methyltransferase fibrillarin. (247 aa)
A1O1_00237Uncharacterized protein. (679 aa)
A1O1_00774Bms1-type G domain-containing protein. (1184 aa)
A1O1_01027Uncharacterized protein. (428 aa)
A1O1_01183WD_REPEATS_REGION domain-containing protein. (602 aa)
A1O1_0581340S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
A1O1_0585340S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (264 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (669 aa)
A1O1_06147Uncharacterized protein. (395 aa)
A1O1_06203HRDC domain-containing protein. (813 aa)
A1O1_0136940S ribosomal protein S28. (63 aa)
A1O1_0139440S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (119 aa)
A1O1_0185220S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (440 aa)
A1O1_0148440S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (262 aa)
A1O1_01514Uncharacterized protein. (274 aa)
A1O1_06549KH_dom_type_1 domain-containing protein. (245 aa)
A1O1_01544Pre-rRNA-processing protein PNO1. (262 aa)
A1O1_0663960S ribosomal protein L43. (92 aa)
A1O1_01668Brix domain-containing protein. (296 aa)
A1O1_02583Uncharacterized protein. (394 aa)
A1O1_02831Exonuclease domain-containing protein. (310 aa)
A1O1_03011Exosome complex component RRP4. (352 aa)
A1O1_02937Sec2p domain-containing protein. (287 aa)
A1O1_0009840S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (150 aa)
A1O1_0017340S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (239 aa)
A1O1_00183Uncharacterized protein. (297 aa)
A1O1_03184CLP1_P domain-containing protein. (625 aa)
A1O1_03264WD_REPEATS_REGION domain-containing protein. (536 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (292 aa)
A1O1_0510240S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (153 aa)
A1O1_0035660S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
A1O1_05234Uncharacterized protein. (504 aa)
Your Current Organism:
Capronia coronata
NCBI taxonomy Id: 1182541
Other names: C. coronata CBS 617.96, Capronia coronata CBS 617.96
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