STRINGSTRING
A1O1_01372 A1O1_01372 A1O1_01610 A1O1_01610 A1O1_01240 A1O1_01240 A1O1_00812 A1O1_00812 A1O1_00037 A1O1_00037 A1O1_03081 A1O1_03081 A1O1_03061 A1O1_03061 A1O1_02117 A1O1_02117 A1O1_04369 A1O1_04369 A1O1_04096 A1O1_04096 A1O1_04035 A1O1_04035 A1O1_03490 A1O1_03490 A1O1_01602 A1O1_01602 A1O1_01587 A1O1_01587 A1O1_01262 A1O1_01262 A1O1_01187 A1O1_01187 A1O1_01132 A1O1_01132 A1O1_01121 A1O1_01121 A1O1_05419 A1O1_05419 A1O1_05364 A1O1_05364 A1O1_05234 A1O1_05234 A1O1_00356 A1O1_00356 A1O1_05102 A1O1_05102 RPS0 RPS0 A1O1_03264 A1O1_03264 A1O1_03184 A1O1_03184 A1O1_00183 A1O1_00183 A1O1_00173 A1O1_00173 TSR3 TSR3 A1O1_03002 A1O1_03002 A1O1_00098 A1O1_00098 A1O1_02937 A1O1_02937 A1O1_03011 A1O1_03011 A1O1_02831 A1O1_02831 A1O1_02583 A1O1_02583 A1O1_01668 A1O1_01668 A1O1_06639 A1O1_06639 A1O1_01544 A1O1_01544 A1O1_06549 A1O1_06549 A1O1_01514 A1O1_01514 A1O1_01484 A1O1_01484 A1O1_01852 A1O1_01852 A1O1_01394 A1O1_01394 A1O1_01369 A1O1_01369 A1O1_06203 A1O1_06203 A1O1_06147 A1O1_06147 NOP7 NOP7 A1O1_05853 A1O1_05853 A1O1_05813 A1O1_05813 A1O1_01183 A1O1_01183 A1O1_01027 A1O1_01027 A1O1_00774 A1O1_00774 A1O1_00237 A1O1_00237 A1O1_00227 A1O1_00227 A1O1_00036 A1O1_00036 A1O1_04467 A1O1_04467 A1O1_07472 A1O1_07472 A1O1_07441 A1O1_07441 A1O1_02506 A1O1_02506 A1O1_03850 A1O1_03850 A1O1_07365 A1O1_07365 A1O1_04232 A1O1_04232 A1O1_07263 A1O1_07263 A1O1_02390 A1O1_02390 A1O1_06903 A1O1_06903 A1O1_01870 A1O1_01870 A1O1_02125 A1O1_02125 A1O1_06717 A1O1_06717 A1O1_03578 A1O1_03578 A1O1_01869 A1O1_01869 A1O1_08112 A1O1_08112 A1O1_08006 A1O1_08006 NAT10 NAT10 A1O1_04353 A1O1_04353 A1O1_04544 A1O1_04544 A1O1_05135 A1O1_05135 A1O1_04672 A1O1_04672 A1O1_05023 A1O1_05023 A1O1_04367 A1O1_04367 A1O1_03948 A1O1_03948 A1O1_03782 A1O1_03782 A1O1_08559 A1O1_08559 A1O1_04044 A1O1_04044 A1O1_04615 A1O1_04615 A1O1_08446 A1O1_08446 A1O1_03891 A1O1_03891 A1O1_03372 A1O1_03372 A1O1_03351 A1O1_03351 A1O1_06280 A1O1_06280 A1O1_09076 A1O1_09076 A1O1_06224 A1O1_06224 A1O1_05830 A1O1_05830 A1O1_05498 A1O1_05498 A1O1_04945 A1O1_04945 A1O1_04835 A1O1_04835 A1O1_04805 A1O1_04805 A1O1_05106 A1O1_05106 A1O1_05045 A1O1_05045 A1O1_07433 A1O1_07433 A1O1_07039 A1O1_07039 A1O1_07397 A1O1_07397 A1O1_06920 A1O1_06920 A1O1_06704 A1O1_06704 A1O1_06442 A1O1_06442 A1O1_06577 A1O1_06577 A1O1_06281 A1O1_06281 ERB1 ERB1 A1O1_05712 A1O1_05712 A1O1_05876 A1O1_05876 A1O1_07816 A1O1_07816 A1O1_07811 A1O1_07811 A1O1_08500 A1O1_08500 A1O1_07500 A1O1_07500 RPS1 RPS1 A1O1_07281 A1O1_07281 A1O1_06917 A1O1_06917 A1O1_07220 A1O1_07220 A1O1_06772 A1O1_06772 A1O1_06705 A1O1_06705 SPB1 SPB1 A1O1_08202 A1O1_08202 A1O1_09248 A1O1_09248 A1O1_08137 A1O1_08137 A1O1_08035 A1O1_08035 A1O1_08015 A1O1_08015 A1O1_07808 A1O1_07808 A1O1_07837 A1O1_07837 YTM1 YTM1 A1O1_08627 A1O1_08627 A1O1_08465 A1O1_08465 A1O1_09004 A1O1_09004 A1O1_08999 A1O1_08999 A1O1_08894 A1O1_08894 A1O1_09164 A1O1_09164 A1O1_09099 A1O1_09099 A1O1_08893 A1O1_08893
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O1_01372rRNA-processing protein FCF1. (195 aa)
A1O1_0161030S ribosomal protein S13p/S18e; Belongs to the universal ribosomal protein uS13 family. (118 aa)
A1O1_01240WD_REPEATS_REGION domain-containing protein. (991 aa)
A1O1_00812U3 small nucleolar RNA-associated protein 22. (1141 aa)
A1O1_0003740S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
A1O1_0308140S ribosomal protein S20. (116 aa)
A1O1_0306140S ribosomal protein S19. (142 aa)
A1O1_02117KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (336 aa)
A1O1_0436940S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
A1O1_04096WD_REPEATS_REGION domain-containing protein. (969 aa)
A1O1_04035Exosome complex component RRP45. (291 aa)
A1O1_0349040S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (215 aa)
A1O1_01602Uncharacterized protein. (219 aa)
A1O1_01587Uncharacterized protein. (350 aa)
A1O1_0126230S ribosomal protein S8. (170 aa)
A1O1_01187WD_REPEATS_REGION domain-containing protein. (937 aa)
A1O1_01132Uncharacterized protein; Belongs to the DEAD box helicase family. (531 aa)
A1O1_01121Uncharacterized protein. (486 aa)
A1O1_05419Uncharacterized protein. (257 aa)
A1O1_0536440S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
A1O1_05234Uncharacterized protein. (504 aa)
A1O1_0035660S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
A1O1_0510240S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (153 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (292 aa)
A1O1_03264WD_REPEATS_REGION domain-containing protein. (536 aa)
A1O1_03184CLP1_P domain-containing protein. (625 aa)
A1O1_00183Uncharacterized protein. (297 aa)
A1O1_0017340S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (239 aa)
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (397 aa)
A1O1_03002THUMP domain-containing protein. (344 aa)
A1O1_0009840S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (150 aa)
A1O1_02937Sec2p domain-containing protein. (287 aa)
A1O1_03011Exosome complex component RRP4. (352 aa)
A1O1_02831Exonuclease domain-containing protein. (310 aa)
A1O1_02583Uncharacterized protein. (394 aa)
A1O1_01668Brix domain-containing protein. (296 aa)
A1O1_0663960S ribosomal protein L43. (92 aa)
A1O1_01544Pre-rRNA-processing protein PNO1. (262 aa)
A1O1_06549KH_dom_type_1 domain-containing protein. (245 aa)
A1O1_01514Uncharacterized protein. (274 aa)
A1O1_0148440S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (262 aa)
A1O1_0185220S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (440 aa)
A1O1_0139440S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (119 aa)
A1O1_0136940S ribosomal protein S28. (63 aa)
A1O1_06203HRDC domain-containing protein. (813 aa)
A1O1_06147Uncharacterized protein. (395 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (669 aa)
A1O1_0585340S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (264 aa)
A1O1_0581340S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
A1O1_01183WD_REPEATS_REGION domain-containing protein. (602 aa)
A1O1_01027Uncharacterized protein. (428 aa)
A1O1_00774Bms1-type G domain-containing protein. (1184 aa)
A1O1_00237Uncharacterized protein. (679 aa)
A1O1_00227rRNA 2'-O-methyltransferase fibrillarin. (247 aa)
A1O1_0003640S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (98 aa)
A1O1_04467DRIM domain-containing protein. (2594 aa)
A1O1_07472Uncharacterized protein. (481 aa)
A1O1_07441U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (752 aa)
A1O1_02506Uncharacterized protein. (199 aa)
A1O1_03850Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (602 aa)
A1O1_07365Uncharacterized protein. (1284 aa)
A1O1_04232CP-type G domain-containing protein. (551 aa)
A1O1_07263Uncharacterized protein. (103 aa)
A1O1_02390WD_REPEATS_REGION domain-containing protein. (888 aa)
A1O1_06903Uncharacterized protein. (298 aa)
A1O1_01870ULP_PROTEASE domain-containing protein. (798 aa)
A1O1_02125Nop domain-containing protein. (517 aa)
A1O1_06717CBF domain-containing protein. (286 aa)
A1O1_03578RNase_PH domain-containing protein. (370 aa)
A1O1_01869Uncharacterized protein. (474 aa)
A1O1_08112Uncharacterized protein. (305 aa)
A1O1_08006CK1/CK1/CK1-D protein kinase; Belongs to the protein kinase superfamily. (372 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1114 aa)
A1O1_04353Uncharacterized protein. (1028 aa)
A1O1_04544WD_REPEATS_REGION domain-containing protein. (594 aa)
A1O1_05135Ribonuclease P/MRP protein subunit RPP1. (387 aa)
A1O1_04672Nucleolar protein 58. (630 aa)
A1O1_05023U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (277 aa)
A1O1_0436740S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
A1O1_03948RNase_PH domain-containing protein. (381 aa)
A1O1_03782Uncharacterized protein. (933 aa)
A1O1_0855960S ribosomal protein L2. (254 aa)
A1O1_04044Uncharacterized protein. (524 aa)
A1O1_046155'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1062 aa)
A1O1_08446Ipi1_N domain-containing protein. (335 aa)
A1O1_03891rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (399 aa)
A1O1_0337240S ribosomal protein S17. (150 aa)
A1O1_0335118S rRNA biogenesis protein RCL1. (405 aa)
A1O1_06280Uncharacterized protein; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (304 aa)
A1O1_0907640S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (162 aa)
A1O1_0622440S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (155 aa)
A1O1_0583040S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (193 aa)
A1O1_05498S4 RNA-binding domain-containing protein. (188 aa)
A1O1_04945WD_REPEATS_REGION domain-containing protein. (502 aa)
A1O1_04835ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family. (478 aa)
A1O1_04805Uncharacterized protein. (412 aa)
A1O1_05106Uncharacterized protein. (912 aa)
A1O1_05045Sas10 domain-containing protein. (640 aa)
A1O1_07433Uncharacterized protein. (181 aa)
A1O1_07039BP28CT domain-containing protein. (1868 aa)
A1O1_0739740S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (146 aa)
A1O1_0692060S ribosomal protein L34-B. (117 aa)
A1O1_0670440S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (203 aa)
A1O1_06442Uncharacterized protein. (417 aa)
A1O1_06577Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A1O1_06281Uncharacterized protein. (1074 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (787 aa)
A1O1_05712S4 RNA-binding domain-containing protein. (451 aa)
A1O1_05876Uncharacterized protein. (596 aa)
A1O1_07816Uncharacterized protein. (338 aa)
A1O1_07811Utp12 domain-containing protein. (911 aa)
A1O1_08500Ribosomal protein L28e. (152 aa)
A1O1_07500RIX1 domain-containing protein. (789 aa)
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (257 aa)
A1O1_07281WD_REPEATS_REGION domain-containing protein. (980 aa)
A1O1_06917RNase_PH domain-containing protein. (258 aa)
A1O1_0722040S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
A1O1_06772RNase_PH domain-containing protein. (259 aa)
A1O1_06705Small subunit ribosomal protein S10e. (181 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (832 aa)
A1O1_08202Uncharacterized protein. (262 aa)
A1O1_09248Uncharacterized protein. (210 aa)
A1O1_08137U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (729 aa)
A1O1_08035Uncharacterized protein. (741 aa)
A1O1_08015WD_REPEATS_REGION domain-containing protein. (534 aa)
A1O1_07808Bms1-type G domain-containing protein. (805 aa)
A1O1_07837WD_REPEATS_REGION domain-containing protein. (555 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (459 aa)
A1O1_08627Uncharacterized protein. (307 aa)
A1O1_08465ULP_PROTEASE domain-containing protein. (968 aa)
A1O1_09004Atypical/RIO/RIO2 protein kinase. (383 aa)
A1O1_08999RNase_PH domain-containing protein. (310 aa)
A1O1_08894Uncharacterized protein. (274 aa)
A1O1_09164Uncharacterized protein. (1812 aa)
A1O1_0909940S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (261 aa)
A1O1_08893Uncharacterized protein. (263 aa)
Your Current Organism:
Capronia coronata
NCBI taxonomy Id: 1182541
Other names: C. coronata CBS 617.96, Capronia coronata CBS 617.96
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