6 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_05419	Uncharacterized protein. (522 aa)
	A1O3_05673	Uncharacterized protein. (838 aa)
	A1O3_06458	Uncharacterized protein. (656 aa)
	A1O3_08720	Uncharacterized protein. (1049 aa)
	A1O3_05959	BZIP domain-containing protein. (252 aa)
	A1O3_04449	Uncharacterized protein. (505 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_04449	A1O3_05419	W9YYW9	W9XVZ9	Uncharacterized protein.	Uncharacterized protein.	0.855
A1O3_04449	A1O3_05673	W9YYW9	W9XXP6	Uncharacterized protein.	Uncharacterized protein.	0.984
A1O3_04449	A1O3_05959	W9YYW9	W9YSM3	Uncharacterized protein.	BZIP domain-containing protein.	0.875
A1O3_04449	A1O3_06458	W9YYW9	W9XZ39	Uncharacterized protein.	Uncharacterized protein.	0.877
A1O3_04449	A1O3_08720	W9YYW9	W9YA04	Uncharacterized protein.	Uncharacterized protein.	0.770
A1O3_05419	A1O3_04449	W9XVZ9	W9YYW9	Uncharacterized protein.	Uncharacterized protein.	0.855
A1O3_05419	A1O3_05673	W9XVZ9	W9XXP6	Uncharacterized protein.	Uncharacterized protein.	0.878
A1O3_05419	A1O3_05959	W9XVZ9	W9YSM3	Uncharacterized protein.	BZIP domain-containing protein.	0.955
A1O3_05419	A1O3_06458	W9XVZ9	W9XZ39	Uncharacterized protein.	Uncharacterized protein.	0.915
A1O3_05419	A1O3_08720	W9XVZ9	W9YA04	Uncharacterized protein.	Uncharacterized protein.	0.985
A1O3_05673	A1O3_04449	W9XXP6	W9YYW9	Uncharacterized protein.	Uncharacterized protein.	0.984
A1O3_05673	A1O3_05419	W9XXP6	W9XVZ9	Uncharacterized protein.	Uncharacterized protein.	0.878
A1O3_05673	A1O3_05959	W9XXP6	W9YSM3	Uncharacterized protein.	BZIP domain-containing protein.	0.997
A1O3_05673	A1O3_06458	W9XXP6	W9XZ39	Uncharacterized protein.	Uncharacterized protein.	0.995
A1O3_05673	A1O3_08720	W9XXP6	W9YA04	Uncharacterized protein.	Uncharacterized protein.	0.980
A1O3_05959	A1O3_04449	W9YSM3	W9YYW9	BZIP domain-containing protein.	Uncharacterized protein.	0.875
A1O3_05959	A1O3_05419	W9YSM3	W9XVZ9	BZIP domain-containing protein.	Uncharacterized protein.	0.955
A1O3_05959	A1O3_05673	W9YSM3	W9XXP6	BZIP domain-containing protein.	Uncharacterized protein.	0.997
A1O3_05959	A1O3_06458	W9YSM3	W9XZ39	BZIP domain-containing protein.	Uncharacterized protein.	0.973
A1O3_05959	A1O3_08720	W9YSM3	W9YA04	BZIP domain-containing protein.	Uncharacterized protein.	0.862