13 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_08098	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (62 aa)
	A1O3_08264	Large subunit ribosomal protein L23Ae. (155 aa)
	A1O3_08682	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (119 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
	A1O3_05785	Small subunit ribosomal protein S18e. (192 aa)
	A1O3_04500	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
	A1O3_02034	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (239 aa)
	A1O3_03057	40S ribosomal protein S19. (154 aa)
	A1O3_01432	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	A1O3_01137	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (264 aa)
	A1O3_01430	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	A1O3_03410	Large subunit ribosomal protein L19e. (98 aa)
	A1O3_01191	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_01137	A1O3_01191	W9YSE7	W9ZDP3	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.999
A1O3_01137	A1O3_01430	W9YSE7	W9YUG1	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.999
A1O3_01137	A1O3_01432	W9YSE7	W9YK22	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.999
A1O3_01137	A1O3_02034	W9YSE7	W9YH38	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
A1O3_01137	A1O3_03057	W9YSE7	W9YJY4	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	40S ribosomal protein S19.	0.999
A1O3_01137	A1O3_03410	W9YSE7	W9YW02	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	Large subunit ribosomal protein L19e.	0.999
A1O3_01137	A1O3_04500	W9YSE7	W9YCZ6	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
A1O3_01137	A1O3_05785	W9YSE7	W9Y645	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	Small subunit ribosomal protein S18e.	0.999
A1O3_01137	A1O3_08098	W9YSE7	W9XHV7	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.997
A1O3_01137	A1O3_08264	W9YSE7	W9XIF0	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	Large subunit ribosomal protein L23Ae.	0.999
A1O3_01137	A1O3_08682	W9YSE7	W9XQC1	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
A1O3_01137	RPS0	W9YSE7	W9Y1H9	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
A1O3_01191	A1O3_01137	W9ZDP3	W9YSE7	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
A1O3_01191	A1O3_01430	W9ZDP3	W9YUG1	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.999
A1O3_01191	A1O3_01432	W9ZDP3	W9YK22	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.999
A1O3_01191	A1O3_02034	W9ZDP3	W9YH38	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
A1O3_01191	A1O3_03057	W9ZDP3	W9YJY4	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	40S ribosomal protein S19.	0.999
A1O3_01191	A1O3_03410	W9ZDP3	W9YW02	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Large subunit ribosomal protein L19e.	0.999
A1O3_01191	A1O3_04500	W9ZDP3	W9YCZ6	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
A1O3_01191	A1O3_05785	W9ZDP3	W9Y645	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Small subunit ribosomal protein S18e.	0.999