6 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_05211	Small nuclear ribonucleoprotein Sm D2. (75 aa)
	A1O3_03484	Small nuclear ribonucleoprotein F. (78 aa)
	A1O3_02409	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (132 aa)
	A1O3_07058	Small nuclear ribonucleoprotein G. (80 aa)
	A1O3_00317	CID domain-containing protein. (383 aa)
	A1O3_00910	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_00317	A1O3_00910	W9YFV0	W9YRV3	CID domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
A1O3_00317	A1O3_02409	W9YFV0	W9Y949	CID domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
A1O3_00317	A1O3_03484	W9YFV0	W9Y218	CID domain-containing protein.	Small nuclear ribonucleoprotein F.	0.997
A1O3_00317	A1O3_05211	W9YFV0	W9XVF8	CID domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
A1O3_00317	A1O3_07058	W9YFV0	W9YEP2	CID domain-containing protein.	Small nuclear ribonucleoprotein G.	0.999
A1O3_00910	A1O3_00317	W9YRV3	W9YFV0	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	CID domain-containing protein.	0.999
A1O3_00910	A1O3_02409	W9YRV3	W9Y949	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
A1O3_00910	A1O3_03484	W9YRV3	W9Y218	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein F.	0.999
A1O3_00910	A1O3_05211	W9YRV3	W9XVF8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D2.	0.999
A1O3_00910	A1O3_07058	W9YRV3	W9YEP2	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein G.	0.999
A1O3_02409	A1O3_00317	W9Y949	W9YFV0	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	CID domain-containing protein.	0.999
A1O3_02409	A1O3_00910	W9Y949	W9YRV3	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
A1O3_02409	A1O3_03484	W9Y949	W9Y218	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein F.	0.999
A1O3_02409	A1O3_05211	W9Y949	W9XVF8	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
A1O3_02409	A1O3_07058	W9Y949	W9YEP2	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein G.	0.999
A1O3_03484	A1O3_00317	W9Y218	W9YFV0	Small nuclear ribonucleoprotein F.	CID domain-containing protein.	0.997
A1O3_03484	A1O3_00910	W9Y218	W9YRV3	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
A1O3_03484	A1O3_02409	W9Y218	W9Y949	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
A1O3_03484	A1O3_05211	W9Y218	W9XVF8	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein Sm D2.	0.999
A1O3_03484	A1O3_07058	W9Y218	W9YEP2	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein G.	0.999