STRINGSTRING
A1O3_10400 A1O3_10400 LSM4 LSM4 A1O3_09564 A1O3_09564 LSM8 LSM8 A1O3_06822 A1O3_06822 A1O3_06817 A1O3_06817 A1O3_06524 A1O3_06524 A1O3_06504 A1O3_06504 A1O3_06054 A1O3_06054 A1O3_06158 A1O3_06158 A1O3_06103 A1O3_06103 A1O3_05783 A1O3_05783 A1O3_05917 A1O3_05917 A1O3_07784 A1O3_07784 A1O3_05587 A1O3_05587 A1O3_05090 A1O3_05090 A1O3_05045 A1O3_05045 A1O3_07446 A1O3_07446 A1O3_07762 A1O3_07762 A1O3_05211 A1O3_05211 A1O3_04825 A1O3_04825 A1O3_04820 A1O3_04820 A1O3_05135 A1O3_05135 A1O3_07158 A1O3_07158 LSM3 LSM3 A1O3_07060 A1O3_07060 A1O3_04904 A1O3_04904 A1O3_04649 A1O3_04649 A1O3_08292 A1O3_08292 A1O3_08166 A1O3_08166 A1O3_08266 A1O3_08266 A1O3_07915 A1O3_07915 A1O3_06608 A1O3_06608 A1O3_06146 A1O3_06146 A1O3_06486 A1O3_06486 A1O3_06465 A1O3_06465 A1O3_06016 A1O3_06016 A1O3_08766 A1O3_08766 A1O3_06265 A1O3_06265 A1O3_06255 A1O3_06255 A1O3_09575 A1O3_09575 A1O3_07700 A1O3_07700 A1O3_07638 A1O3_07638 A1O3_09191 A1O3_09191 A1O3_09356 A1O3_09356 A1O3_09246 A1O3_09246 A1O3_09211 A1O3_09211 A1O3_09874 A1O3_09874 A1O3_09039 A1O3_09039 A1O3_07325 A1O3_07325 A1O3_09642 A1O3_09642 A1O3_07255 A1O3_07255 A1O3_09597 A1O3_09597 A1O3_09979 A1O3_09979 A1O3_07133 A1O3_07133 A1O3_09939 A1O3_09939 A1O3_09879 A1O3_09879 A1O3_09782 A1O3_09782 A1O3_10294 A1O3_10294 A1O3_09626 A1O3_09626 A1O3_09611 A1O3_09611 A1O3_04823 A1O3_04823 A1O3_05275 A1O3_05275 A1O3_04448 A1O3_04448 A1O3_04958 A1O3_04958 A1O3_09836 A1O3_09836 A1O3_05575 A1O3_05575 A1O3_05620 A1O3_05620 A1O3_05306 A1O3_05306 A1O3_09380 A1O3_09380 A1O3_01856 A1O3_01856 A1O3_05946 A1O3_05946 A1O3_01951 A1O3_01951 A1O3_02278 A1O3_02278 A1O3_02032 A1O3_02032 A1O3_02409 A1O3_02409 A1O3_02564 A1O3_02564 A1O3_03416 A1O3_03416 A1O3_03538 A1O3_03538 A1O3_08816 A1O3_08816 A1O3_03543 A1O3_03543 A1O3_02630 A1O3_02630 A1O3_03849 A1O3_03849 A1O3_03020 A1O3_03020 A1O3_03182 A1O3_03182 A1O3_08260 A1O3_08260 A1O3_04304 A1O3_04304 A1O3_04365 A1O3_04365 A1O3_04460 A1O3_04460 A1O3_04155 A1O3_04155 A1O3_06963 A1O3_06963 A1O3_07058 A1O3_07058 A1O3_00457 A1O3_00457 A1O3_01830 A1O3_01830 A1O3_00618 A1O3_00618 A1O3_01915 A1O3_01915 A1O3_02245 A1O3_02245 A1O3_01431 A1O3_01431 A1O3_02483 A1O3_02483 A1O3_01330 A1O3_01330 A1O3_01670 A1O3_01670 A1O3_01690 A1O3_01690 A1O3_04746 A1O3_04746 A1O3_00175 A1O3_00175 A1O3_00245 A1O3_00245 A1O3_05264 A1O3_05264 A1O3_00296 A1O3_00296 A1O3_00855 A1O3_00855 A1O3_00910 A1O3_00910 A1O3_05734 A1O3_05734 A1O3_01062 A1O3_01062 A1O3_00921 A1O3_00921 A1O3_01007 A1O3_01007 A1O3_01409 A1O3_01409 A1O3_01048 A1O3_01048 A1O3_01571 A1O3_01571 A1O3_01586 A1O3_01586 A1O3_01707 A1O3_01707 A1O3_01717 A1O3_01717 A1O3_03300 A1O3_03300 A1O3_03748 A1O3_03748 A1O3_04092 A1O3_04092 A1O3_01863 A1O3_01863 A1O3_02631 A1O3_02631 A1O3_00669 A1O3_00669 A1O3_01121 A1O3_01121 A1O3_01423 A1O3_01423 A1O3_01620 A1O3_01620 A1O3_09596 A1O3_09596 A1O3_08274 A1O3_08274 A1O3_08283 A1O3_08283 A1O3_07933 A1O3_07933 A1O3_08960 A1O3_08960 A1O3_08775 A1O3_08775 A1O3_08769 A1O3_08769 A1O3_08944 A1O3_08944 A1O3_08639 A1O3_08639 A1O3_08468 A1O3_08468 A1O3_09394 A1O3_09394 A1O3_04743 A1O3_04743 A1O3_04997 A1O3_04997 A1O3_04982 A1O3_04982 A1O3_04096 A1O3_04096 A1O3_10106 A1O3_10106 A1O3_03892 A1O3_03892 A1O3_04226 A1O3_04226 A1O3_03821 A1O3_03821 A1O3_03484 A1O3_03484 A1O3_03483 A1O3_03483 A1O3_06656 A1O3_06656 A1O3_06646 A1O3_06646 A1O3_03313 A1O3_03313
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O3_10400Matrin-type domain-containing protein. (532 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (90 aa)
A1O3_09564Uncharacterized protein. (793 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A1O3_06822CID domain-containing protein. (861 aa)
A1O3_06817CMGC/DYRK/PRP4 protein kinase. (750 aa)
A1O3_06524Tudor domain-containing protein. (293 aa)
A1O3_06504Nuclear cap-binding protein subunit 2. (178 aa)
A1O3_06054Slu7 domain-containing protein. (501 aa)
A1O3_06158Branchpoint-bridging protein. (562 aa)
A1O3_06103CMGC/SRPK protein kinase. (765 aa)
A1O3_05783Uncharacterized protein. (304 aa)
A1O3_05917Uncharacterized protein. (1176 aa)
A1O3_07784Uncharacterized protein. (330 aa)
A1O3_05587FHA domain-containing protein. (281 aa)
A1O3_05090Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
A1O3_05045Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (765 aa)
A1O3_07446WD_REPEATS_REGION domain-containing protein. (294 aa)
A1O3_07762WD_REPEATS_REGION domain-containing protein. (590 aa)
A1O3_05211Small nuclear ribonucleoprotein Sm D2. (75 aa)
A1O3_04825Pre-mRNA-splicing factor syf1. (861 aa)
A1O3_04820GST N-terminal domain-containing protein. (246 aa)
A1O3_05135J domain-containing protein. (257 aa)
A1O3_07158RRM domain-containing protein. (224 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (101 aa)
A1O3_07060Uncharacterized protein. (477 aa)
A1O3_04904MFAP1 domain-containing protein. (500 aa)
A1O3_04649CMGC/SRPK protein kinase. (355 aa)
A1O3_08292Uncharacterized protein. (204 aa)
A1O3_08166Uncharacterized protein. (587 aa)
A1O3_08266Uncharacterized protein. (155 aa)
A1O3_07915Uncharacterized protein. (338 aa)
A1O3_06608C2H2-type domain-containing protein. (217 aa)
A1O3_06146CMGC/SRPK protein kinase. (390 aa)
A1O3_06486Uncharacterized protein. (945 aa)
A1O3_06465DUF2040 domain-containing protein. (405 aa)
A1O3_06016CMGC/SRPK protein kinase. (400 aa)
A1O3_08766G-patch_2 domain-containing protein. (454 aa)
A1O3_06265Sde2_N_Ubi domain-containing protein. (340 aa)
A1O3_06255Uncharacterized protein. (659 aa)
A1O3_09575Uncharacterized protein. (384 aa)
A1O3_07700Uncharacterized protein. (561 aa)
A1O3_07638RRM domain-containing protein. (195 aa)
A1O3_09191Elongation factor 2. (982 aa)
A1O3_09356CMGC/SRPK protein kinase. (333 aa)
A1O3_09246Serine/threonine-protein kinase PRP4. (502 aa)
A1O3_09211Adenosinetriphosphatase. (992 aa)
A1O3_09874Cir_N domain-containing protein. (404 aa)
A1O3_09039Adenosinetriphosphatase. (981 aa)
A1O3_07325C2H2-type domain-containing protein. (162 aa)
A1O3_09642G-patch domain-containing protein. (724 aa)
A1O3_07255Uncharacterized protein. (537 aa)
A1O3_09597Mago nashi protein. (172 aa)
A1O3_09979Uncharacterized protein. (511 aa)
A1O3_07133Uncharacterized protein. (417 aa)
A1O3_09939Protein kinase domain-containing protein. (237 aa)
A1O3_09879Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A1O3_09782CMGC/SRPK protein kinase; Belongs to the protein kinase superfamily. (371 aa)
A1O3_10294Uncharacterized protein. (751 aa)
A1O3_09626Uncharacterized protein. (149 aa)
A1O3_09611Pre-mRNA-splicing factor clf1. (677 aa)
A1O3_04823Uncharacterized protein. (252 aa)
A1O3_05275Uncharacterized protein. (1663 aa)
A1O3_04448Pre-mRNA-splicing factor rse1. (1210 aa)
A1O3_04958Adenosinetriphosphatase. (1230 aa)
A1O3_09836Uncharacterized protein. (685 aa)
A1O3_05575Uncharacterized protein. (310 aa)
A1O3_05620Uncharacterized protein. (210 aa)
A1O3_05306DnaJ like subfamily C member 8. (212 aa)
A1O3_09380RRM domain-containing protein. (294 aa)
A1O3_01856U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (182 aa)
A1O3_05946Matrin-type domain-containing protein. (239 aa)
A1O3_01951Uncharacterized protein. (655 aa)
A1O3_02278U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (572 aa)
A1O3_02032Uncharacterized protein. (332 aa)
A1O3_02409Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (132 aa)
A1O3_02564Uncharacterized protein. (489 aa)
A1O3_03416CMGC/SRPK protein kinase. (439 aa)
A1O3_03538Uncharacterized protein. (525 aa)
A1O3_08816CMGC/SRPK protein kinase. (553 aa)
A1O3_03543Uncharacterized protein. (237 aa)
A1O3_02630Pre-mRNA-splicing factor ini1. (110 aa)
A1O3_03849RRM domain-containing protein. (203 aa)
A1O3_03020RRM domain-containing protein. (199 aa)
A1O3_03182Uncharacterized protein. (560 aa)
A1O3_08260KH domain-containing protein. (493 aa)
A1O3_04304DUF1716 domain-containing protein. (606 aa)
A1O3_04365Uncharacterized protein. (209 aa)
A1O3_04460Small nuclear ribonucleoprotein. (138 aa)
A1O3_04155NmrA domain-containing protein. (303 aa)
A1O3_06963Uncharacterized protein. (2222 aa)
A1O3_07058Small nuclear ribonucleoprotein G. (80 aa)
A1O3_00457U2 small nuclear ribonucleoprotein A. (248 aa)
A1O3_01830Uncharacterized protein. (1289 aa)
A1O3_00618Pre-mRNA-splicing factor isy1. (253 aa)
A1O3_01915SF3b1 domain-containing protein. (1232 aa)
A1O3_02245RRM domain-containing protein. (332 aa)
A1O3_01431Uncharacterized protein. (413 aa)
A1O3_02483Protein kinase domain-containing protein. (273 aa)
A1O3_01330Cyclohexanone monooxygenase. (805 aa)
A1O3_01670RRM domain-containing protein. (314 aa)
A1O3_01690Uncharacterized protein. (432 aa)
A1O3_04746RRM domain-containing protein. (480 aa)
A1O3_00175Uncharacterized protein. (296 aa)
A1O3_00245Uncharacterized protein. (613 aa)
A1O3_05264Uncharacterized protein. (360 aa)
A1O3_00296Pre-mRNA-processing protein 45. (587 aa)
A1O3_00855Uncharacterized protein. (243 aa)
A1O3_00910Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
A1O3_05734U1-type domain-containing protein. (293 aa)
A1O3_01062Uncharacterized protein. (343 aa)
A1O3_00921DBR1 domain-containing protein. (864 aa)
A1O3_01007CMGC protein kinase. (346 aa)
A1O3_01409CMGC/SRPK protein kinase. (589 aa)
A1O3_01048Uncharacterized protein. (566 aa)
A1O3_01571RRM domain-containing protein. (116 aa)
A1O3_01586Uncharacterized protein. (293 aa)
A1O3_01707Uncharacterized protein. (560 aa)
A1O3_01717Uncharacterized protein. (336 aa)
A1O3_03300Uncharacterized protein. (256 aa)
A1O3_03748Uncharacterized protein. (587 aa)
A1O3_04092Uncharacterized protein. (541 aa)
A1O3_01863Splicing factor subunit; Belongs to the SF3B5 family. (85 aa)
A1O3_02631Pinin_SDK_memA domain-containing protein. (378 aa)
A1O3_00669WD_REPEATS_REGION domain-containing protein. (343 aa)
A1O3_01121WD_REPEATS_REGION domain-containing protein. (359 aa)
A1O3_01423Uncharacterized protein. (764 aa)
A1O3_01620Uncharacterized protein. (232 aa)
A1O3_09596Nop domain-containing protein. (600 aa)
A1O3_08274CMGC/SRPK protein kinase. (399 aa)
A1O3_08283Uncharacterized protein. (314 aa)
A1O3_07933Uncharacterized protein. (337 aa)
A1O3_08960TPR_REGION domain-containing protein. (572 aa)
A1O3_08775U6 snRNA-associated Sm-like protein LSm6. (91 aa)
A1O3_08769Ubiquitin thiolesterase. (585 aa)
A1O3_08944Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1411 aa)
A1O3_08639Sm domain-containing protein. (130 aa)
A1O3_08468Small nuclear ribonucleoprotein B and B. (227 aa)
A1O3_09394U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A1O3_04743Pre-mRNA-processing factor 19. (465 aa)
A1O3_04997Uncharacterized protein. (359 aa)
A1O3_04982Pre-mRNA-splicing factor prp46. (439 aa)
A1O3_04096MPN domain-containing protein. (2506 aa)
A1O3_10106G-patch domain-containing protein. (655 aa)
A1O3_03892Uncharacterized protein. (368 aa)
A1O3_04226SFM domain-containing protein. (380 aa)
A1O3_03821PSP domain-containing protein. (592 aa)
A1O3_03484Small nuclear ribonucleoprotein F. (78 aa)
A1O3_03483Uncharacterized protein. (119 aa)
A1O3_06656Uncharacterized protein. (308 aa)
A1O3_06646Uncharacterized protein. (223 aa)
A1O3_03313Uncharacterized protein. (665 aa)
Your Current Organism:
Capronia epimyces
NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96
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