12 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	A1O3_07058	Small nuclear ribonucleoprotein G. (80 aa)
	A1O3_00023	GYF domain-containing protein. (460 aa)
	A1O3_00910	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
	A1O3_06963	Uncharacterized protein. (2222 aa)
	A1O3_02409	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (132 aa)
	A1O3_04096	MPN domain-containing protein. (2506 aa)
	A1O3_04226	SFM domain-containing protein. (380 aa)
	A1O3_05090	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
	A1O3_05211	Small nuclear ribonucleoprotein Sm D2. (75 aa)
	A1O3_09191	Elongation factor 2. (982 aa)
	A1O3_08468	Small nuclear ribonucleoprotein B and B. (227 aa)
	A1O3_01431	Uncharacterized protein. (413 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_00023	A1O3_00910	W9YP86	W9YRV3	GYF domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.772
A1O3_00023	A1O3_01431	W9YP86	W9YJ36	GYF domain-containing protein.	Uncharacterized protein.	0.818
A1O3_00023	A1O3_02409	W9YP86	W9Y949	GYF domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.640
A1O3_00023	A1O3_04096	W9YP86	W9Y3Q3	GYF domain-containing protein.	MPN domain-containing protein.	0.934
A1O3_00023	A1O3_05090	W9YP86	W9XW29	GYF domain-containing protein.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.945
A1O3_00023	A1O3_05211	W9YP86	W9XVF8	GYF domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.663
A1O3_00023	A1O3_06963	W9YP86	W9YEE0	GYF domain-containing protein.	Uncharacterized protein.	0.983
A1O3_00023	A1O3_07058	W9YP86	W9YEP2	GYF domain-containing protein.	Small nuclear ribonucleoprotein G.	0.448
A1O3_00023	A1O3_08468	W9YP86	W9XFI0	GYF domain-containing protein.	Small nuclear ribonucleoprotein B and B.	0.838
A1O3_00023	A1O3_09191	W9YP86	W9XM23	GYF domain-containing protein.	Elongation factor 2.	0.897
A1O3_00910	A1O3_00023	W9YRV3	W9YP86	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	GYF domain-containing protein.	0.772
A1O3_00910	A1O3_02409	W9YRV3	W9Y949	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
A1O3_00910	A1O3_04096	W9YRV3	W9Y3Q3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	MPN domain-containing protein.	0.994
A1O3_00910	A1O3_04226	W9YRV3	W9Y371	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	SFM domain-containing protein.	0.758
A1O3_00910	A1O3_05090	W9YRV3	W9XW29	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.980
A1O3_00910	A1O3_05211	W9YRV3	W9XVF8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D2.	0.999
A1O3_00910	A1O3_06963	W9YRV3	W9YEE0	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.995
A1O3_00910	A1O3_07058	W9YRV3	W9YEP2	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein G.	0.999
A1O3_00910	A1O3_08468	W9YRV3	W9XFI0	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein B and B.	0.992
A1O3_00910	A1O3_09191	W9YRV3	W9XM23	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Elongation factor 2.	0.997