18 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_09225	Thioredoxin-like_fold domain-containing protein. (210 aa)
	A1O3_02031	WD_REPEATS_REGION domain-containing protein. (588 aa)
	A1O3_02046	Uncharacterized protein. (805 aa)
	A1O3_08290	PHD-type domain-containing protein. (1465 aa)
	A1O3_04315	Hist_deacetyl domain-containing protein. (366 aa)
	A1O3_07397	HET domain-containing protein. (766 aa)
	A1O3_02089	Deacetylase sirtuin-type domain-containing protein. (613 aa)
	A1O3_00230	HDAC_interact domain-containing protein. (1406 aa)
	A1O3_00930	MRG domain-containing protein. (863 aa)
	A1O3_00589	Histone deacetylase 1/2. (680 aa)
	A1O3_01610	PHD-type domain-containing protein. (1124 aa)
	A1O3_09001	FAS1 domain-containing protein. (226 aa)
	A1O3_09646	RXT2_N domain-containing protein. (497 aa)
	A1O3_09195	Uncharacterized protein. (460 aa)
	A1O3_09217	Uncharacterized protein. (476 aa)
	A1O3_09447	Uncharacterized protein. (685 aa)
	A1O3_05298	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (809 aa)
	A1O3_05687	Deacetylase sirtuin-type domain-containing protein. (604 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_00230	A1O3_00589	W9YPT1	W9ZC02	HDAC_interact domain-containing protein.	Histone deacetylase 1/2.	0.937
A1O3_00230	A1O3_00930	W9YPT1	W9YRX0	HDAC_interact domain-containing protein.	MRG domain-containing protein.	0.839
A1O3_00230	A1O3_01610	W9YPT1	W9ZEX3	HDAC_interact domain-containing protein.	PHD-type domain-containing protein.	0.848
A1O3_00230	A1O3_02031	W9YPT1	W9Y7Z8	HDAC_interact domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.693
A1O3_00230	A1O3_02046	W9YPT1	W9Y814	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.660
A1O3_00230	A1O3_04315	W9YPT1	W9YDQ1	HDAC_interact domain-containing protein.	Hist_deacetyl domain-containing protein.	0.725
A1O3_00230	A1O3_05298	W9YPT1	W9XWL3	HDAC_interact domain-containing protein.	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	0.725
A1O3_00230	A1O3_09217	W9YPT1	W9XM50	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.802
A1O3_00230	A1O3_09447	W9YPT1	W9XMT6	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.517
A1O3_00230	A1O3_09646	W9YPT1	W9XJB2	HDAC_interact domain-containing protein.	RXT2_N domain-containing protein.	0.621
A1O3_00589	A1O3_00230	W9ZC02	W9YPT1	Histone deacetylase 1/2.	HDAC_interact domain-containing protein.	0.937
A1O3_00589	A1O3_00930	W9ZC02	W9YRX0	Histone deacetylase 1/2.	MRG domain-containing protein.	0.976
A1O3_00589	A1O3_01610	W9ZC02	W9ZEX3	Histone deacetylase 1/2.	PHD-type domain-containing protein.	0.919
A1O3_00589	A1O3_02031	W9ZC02	W9Y7Z8	Histone deacetylase 1/2.	WD_REPEATS_REGION domain-containing protein.	0.944
A1O3_00589	A1O3_02046	W9ZC02	W9Y814	Histone deacetylase 1/2.	Uncharacterized protein.	0.826
A1O3_00589	A1O3_02089	W9ZC02	W9YH89	Histone deacetylase 1/2.	Deacetylase sirtuin-type domain-containing protein.	0.536
A1O3_00589	A1O3_04315	W9ZC02	W9YDQ1	Histone deacetylase 1/2.	Hist_deacetyl domain-containing protein.	0.839
A1O3_00589	A1O3_05298	W9ZC02	W9XWL3	Histone deacetylase 1/2.	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	0.847
A1O3_00589	A1O3_05687	W9ZC02	W9XWT2	Histone deacetylase 1/2.	Deacetylase sirtuin-type domain-containing protein.	0.536
A1O3_00589	A1O3_07397	W9ZC02	W9YFN1	Histone deacetylase 1/2.	HET domain-containing protein.	0.850