49 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_01137	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (264 aa)
	A1O3_10396	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (199 aa)
	A1O3_09834	60S ribosomal protein L9-B. (195 aa)
	A1O3_09082	Uncharacterized protein. (497 aa)
	A1O3_09269	Uncharacterized protein. (257 aa)
	A1O3_08482	Uncharacterized protein. (346 aa)
	A1O3_07958	Brix domain-containing protein. (447 aa)
	A1O3_08388	Brix domain-containing protein. (296 aa)
	A1O3_08264	Large subunit ribosomal protein L23Ae. (155 aa)
	A1O3_10443	60S ribosomal protein L5. (301 aa)
	A1O3_10516	Uncharacterized protein. (301 aa)
	A1O3_09377	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	A1O3_08637	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (582 aa)
	A1O3_07830	S4 RNA-binding domain-containing protein. (447 aa)
	A1O3_07865	Uncharacterized protein. (430 aa)
	A1O3_07104	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (215 aa)
	A1O3_04765	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (248 aa)
	A1O3_07697	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (162 aa)
	A1O3_05035	50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (154 aa)
	A1O3_07763	Uncharacterized protein. (223 aa)
	A1O3_05486	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (432 aa)
	A1O3_05892	Uncharacterized protein. (265 aa)
	A1O3_06640	Brix domain-containing protein. (453 aa)
	A1O3_06249	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (309 aa)
	A1O3_03525	Uncharacterized protein. (341 aa)
	A1O3_04837	Uncharacterized protein. (1803 aa)
	A1O3_04653	Uncharacterized protein. (139 aa)
	A1O3_05785	Small subunit ribosomal protein S18e. (192 aa)
	A1O3_09093	S4 RNA-binding domain-containing protein. (190 aa)
	A1O3_02328	Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family. (254 aa)
	A1O3_08469	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (175 aa)
	A1O3_03156	Uncharacterized protein. (769 aa)
	A1O3_03524	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (193 aa)
	A1O3_03624	Uncharacterized protein. (316 aa)
	A1O3_08057	60S ribosomal protein L2. (254 aa)
	A1O3_04049	Valyl-tRNA synthetase. (440 aa)
	A1O3_00001	F-box domain-containing protein. (354 aa)
	A1O3_02139	Ribosomal_S7 domain-containing protein. (364 aa)
	A1O3_02917	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (181 aa)
	A1O3_02583	Fungal_trans domain-containing protein. (799 aa)
	A1O3_03068	Uncharacterized protein. (306 aa)
	A1O3_01494	Uncharacterized protein. (174 aa)
	A1O3_01430	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	A1O3_03445	Uncharacterized protein. (289 aa)
	A1O3_00002	Brix domain-containing protein. (336 aa)
	A1O3_00599	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (115 aa)
	A1O3_00904	Uncharacterized protein. (320 aa)
	A1O3_00919	Uncharacterized protein. (187 aa)
	A1O3_01485	50S ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family. (134 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_00001	A1O3_00002	W9YG06	W9ZAB3	F-box domain-containing protein.	Brix domain-containing protein.	0.478
A1O3_00001	A1O3_00599	W9YG06	W9ZC12	F-box domain-containing protein.	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.799
A1O3_00001	A1O3_00904	W9YG06	W9ZCY4	F-box domain-containing protein.	Uncharacterized protein.	0.705
A1O3_00001	A1O3_01485	W9YG06	W9ZEL2	F-box domain-containing protein.	50S ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family.	0.618
A1O3_00001	A1O3_02328	W9YG06	W9Y8T4	F-box domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.	0.642
A1O3_00001	A1O3_03156	W9YG06	W9YB50	F-box domain-containing protein.	Uncharacterized protein.	0.671
A1O3_00001	A1O3_03524	W9YG06	W9YBE0	F-box domain-containing protein.	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.563
A1O3_00001	A1O3_03525	W9YG06	W9Y183	F-box domain-containing protein.	Uncharacterized protein.	0.638
A1O3_00001	A1O3_04049	W9YG06	W9YCV8	F-box domain-containing protein.	Valyl-tRNA synthetase.	0.960
A1O3_00001	A1O3_04765	W9YG06	W9XV36	F-box domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.979
A1O3_00001	A1O3_04837	W9YG06	W9Y3E7	F-box domain-containing protein.	Uncharacterized protein.	0.929
A1O3_00001	A1O3_05486	W9YG06	W9XX48	F-box domain-containing protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.710
A1O3_00001	A1O3_06249	W9YG06	W9XZP7	F-box domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.892
A1O3_00001	A1O3_06640	W9YG06	W9XZM0	F-box domain-containing protein.	Brix domain-containing protein.	0.879
A1O3_00001	A1O3_07763	W9YG06	W9XWX4	F-box domain-containing protein.	Uncharacterized protein.	0.618
A1O3_00001	A1O3_07830	W9YG06	W9XRD6	F-box domain-containing protein.	S4 RNA-binding domain-containing protein.	0.552
A1O3_00001	A1O3_07865	W9YG06	W9XRG9	F-box domain-containing protein.	Uncharacterized protein.	0.792
A1O3_00001	A1O3_07958	W9YG06	W9XHG2	F-box domain-containing protein.	Brix domain-containing protein.	0.985
A1O3_00001	A1O3_08264	W9YG06	W9XIF0	F-box domain-containing protein.	Large subunit ribosomal protein L23Ae.	0.827
A1O3_00001	A1O3_08388	W9YG06	W9XHV4	F-box domain-containing protein.	Brix domain-containing protein.	0.896