12 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_07084	Uncharacterized protein. (274 aa)
	A1O3_10173	PALP domain-containing protein. (360 aa)
	A1O3_07327	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (376 aa)
	A1O3_06257	PALP domain-containing protein. (193 aa)
	A1O3_02977	Ketol-acid reductoisomerase, mitochondrial; Belongs to the ketol-acid reductoisomerase family. (403 aa)
	A1O3_05834	PALP domain-containing protein. (375 aa)
	A1O3_01682	Uncharacterized protein. (147 aa)
	A1O3_01753	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1192 aa)
	A1O3_02821	Dihydrolipoyllysine-residue succinyltransferase, E2 component. (470 aa)
	A1O3_03301	Acetolactate synthase I/III small subunit. (353 aa)
	A1O3_02594	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (409 aa)
	A1O3_10101	2-oxoglutarate dehydrogenase, mitochondrial. (1050 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_01682	A1O3_07084	W9YTW6	W9XTY7	Uncharacterized protein.	Uncharacterized protein.	0.546
A1O3_02594	A1O3_02821	W9Y9K6	W9Z5G9	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Dihydrolipoyllysine-residue succinyltransferase, E2 component.	0.914
A1O3_02594	A1O3_03301	W9Y9K6	W9Y9Q8	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Acetolactate synthase I/III small subunit.	0.774
A1O3_02594	A1O3_07327	W9Y9K6	W9YFG0	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.999
A1O3_02594	A1O3_10101	W9Y9K6	W9Y3C1	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	2-oxoglutarate dehydrogenase, mitochondrial.	0.903
A1O3_02821	A1O3_02594	W9Z5G9	W9Y9K6	Dihydrolipoyllysine-residue succinyltransferase, E2 component.	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.914
A1O3_02821	A1O3_03301	W9Z5G9	W9Y9Q8	Dihydrolipoyllysine-residue succinyltransferase, E2 component.	Acetolactate synthase I/III small subunit.	0.563
A1O3_02821	A1O3_07327	W9Z5G9	W9YFG0	Dihydrolipoyllysine-residue succinyltransferase, E2 component.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.973
A1O3_02821	A1O3_10101	W9Z5G9	W9Y3C1	Dihydrolipoyllysine-residue succinyltransferase, E2 component.	2-oxoglutarate dehydrogenase, mitochondrial.	0.999
A1O3_02977	A1O3_03301	W9YJR6	W9Y9Q8	Ketol-acid reductoisomerase, mitochondrial; Belongs to the ketol-acid reductoisomerase family.	Acetolactate synthase I/III small subunit.	0.887
A1O3_03301	A1O3_02594	W9Y9Q8	W9Y9K6	Acetolactate synthase I/III small subunit.	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.774
A1O3_03301	A1O3_02821	W9Y9Q8	W9Z5G9	Acetolactate synthase I/III small subunit.	Dihydrolipoyllysine-residue succinyltransferase, E2 component.	0.563
A1O3_03301	A1O3_02977	W9Y9Q8	W9YJR6	Acetolactate synthase I/III small subunit.	Ketol-acid reductoisomerase, mitochondrial; Belongs to the ketol-acid reductoisomerase family.	0.887
A1O3_03301	A1O3_05834	W9Y9Q8	W9YS97	Acetolactate synthase I/III small subunit.	PALP domain-containing protein.	0.843
A1O3_03301	A1O3_06257	W9Y9Q8	W9YJK3	Acetolactate synthase I/III small subunit.	PALP domain-containing protein.	0.843
A1O3_03301	A1O3_07327	W9Y9Q8	W9YFG0	Acetolactate synthase I/III small subunit.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.845
A1O3_03301	A1O3_10101	W9Y9Q8	W9Y3C1	Acetolactate synthase I/III small subunit.	2-oxoglutarate dehydrogenase, mitochondrial.	0.456
A1O3_03301	A1O3_10173	W9Y9Q8	W9XJ67	Acetolactate synthase I/III small subunit.	PALP domain-containing protein.	0.843
A1O3_05834	A1O3_03301	W9YS97	W9Y9Q8	PALP domain-containing protein.	Acetolactate synthase I/III small subunit.	0.843
A1O3_06257	A1O3_03301	W9YJK3	W9Y9Q8	PALP domain-containing protein.	Acetolactate synthase I/III small subunit.	0.843