STRINGSTRING
A1O3_07915 A1O3_07915 A1O3_05211 A1O3_05211 A1O3_05917 A1O3_05917 A1O3_06158 A1O3_06158 A1O3_03821 A1O3_03821 A1O3_05275 A1O3_05275 A1O3_01856 A1O3_01856 A1O3_05946 A1O3_05946 A1O3_02278 A1O3_02278 A1O3_02409 A1O3_02409 A1O3_02564 A1O3_02564 A1O3_03538 A1O3_03538 A1O3_04460 A1O3_04460 A1O3_07058 A1O3_07058 A1O3_01915 A1O3_01915 A1O3_04746 A1O3_04746 A1O3_00365 A1O3_00365 A1O3_00910 A1O3_00910 A1O3_01586 A1O3_01586 A1O3_01423 A1O3_01423 A1O3_10400 A1O3_10400 A1O3_09564 A1O3_09564 A1O3_08468 A1O3_08468 A1O3_09611 A1O3_09611 A1O3_07638 A1O3_07638 A1O3_07700 A1O3_07700 A1O3_06380 A1O3_06380
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O3_07915Uncharacterized protein. (338 aa)
A1O3_05211Small nuclear ribonucleoprotein Sm D2. (75 aa)
A1O3_05917Uncharacterized protein. (1176 aa)
A1O3_06158Branchpoint-bridging protein. (562 aa)
A1O3_03821PSP domain-containing protein. (592 aa)
A1O3_05275Uncharacterized protein. (1663 aa)
A1O3_01856U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (182 aa)
A1O3_05946Matrin-type domain-containing protein. (239 aa)
A1O3_02278U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (572 aa)
A1O3_02409Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (132 aa)
A1O3_02564Uncharacterized protein. (489 aa)
A1O3_03538Uncharacterized protein. (525 aa)
A1O3_04460Small nuclear ribonucleoprotein. (138 aa)
A1O3_07058Small nuclear ribonucleoprotein G. (80 aa)
A1O3_01915SF3b1 domain-containing protein. (1232 aa)
A1O3_04746RRM domain-containing protein. (480 aa)
A1O3_00365Endo-1,3(4)-beta-glucanase. (364 aa)
A1O3_00910Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
A1O3_01586Uncharacterized protein. (293 aa)
A1O3_01423Uncharacterized protein. (764 aa)
A1O3_10400Matrin-type domain-containing protein. (532 aa)
A1O3_09564Uncharacterized protein. (793 aa)
A1O3_08468Small nuclear ribonucleoprotein B and B. (227 aa)
A1O3_09611Pre-mRNA-splicing factor clf1. (677 aa)
A1O3_07638RRM domain-containing protein. (195 aa)
A1O3_07700Uncharacterized protein. (561 aa)
A1O3_06380Endo-1,3(4)-beta-glucanase. (398 aa)
Your Current Organism:
Capronia epimyces
NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.