40 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_01121	WD_REPEATS_REGION domain-containing protein. (359 aa)
	A1O3_09394	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	A1O3_08468	Small nuclear ribonucleoprotein B and B. (227 aa)
	A1O3_08944	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1411 aa)
	A1O3_09611	Pre-mRNA-splicing factor clf1. (677 aa)
	A1O3_09211	Adenosinetriphosphatase. (992 aa)
	A1O3_09191	Elongation factor 2. (982 aa)
	A1O3_07664	Peptidylprolyl isomerase. (617 aa)
	A1O3_06486	Uncharacterized protein. (945 aa)
	A1O3_01620	Uncharacterized protein. (232 aa)
	A1O3_08166	Uncharacterized protein. (587 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (101 aa)
	A1O3_04825	Pre-mRNA-splicing factor syf1. (861 aa)
	A1O3_05211	Small nuclear ribonucleoprotein Sm D2. (75 aa)
	A1O3_07762	WD_REPEATS_REGION domain-containing protein. (590 aa)
	A1O3_05783	Uncharacterized protein. (304 aa)
	A1O3_06449	Peptidylprolyl isomerase. (156 aa)
	A1O3_03484	Small nuclear ribonucleoprotein F. (78 aa)
	A1O3_03821	PSP domain-containing protein. (592 aa)
	A1O3_04096	MPN domain-containing protein. (2506 aa)
	A1O3_04982	Pre-mRNA-splicing factor prp46. (439 aa)
	A1O3_05575	Uncharacterized protein. (310 aa)
	A1O3_05180	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (176 aa)
	A1O3_05620	Uncharacterized protein. (210 aa)
	A1O3_05946	Matrin-type domain-containing protein. (239 aa)
	A1O3_02264	Uncharacterized protein. (313 aa)
	A1O3_03538	Uncharacterized protein. (525 aa)
	A1O3_04460	Small nuclear ribonucleoprotein. (138 aa)
	A1O3_07058	Small nuclear ribonucleoprotein G. (80 aa)
	A1O3_07433	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
	A1O3_00432	PPIase cyclophilin-type domain-containing protein. (576 aa)
	A1O3_01915	SF3b1 domain-containing protein. (1232 aa)
	A1O3_01330	Cyclohexanone monooxygenase. (805 aa)
	A1O3_01690	Uncharacterized protein. (432 aa)
	A1O3_00175	Uncharacterized protein. (296 aa)
	A1O3_01571	RRM domain-containing protein. (116 aa)
	A1O3_04092	Uncharacterized protein. (541 aa)
	A1O3_02631	Pinin_SDK_memA domain-containing protein. (378 aa)
	A1O3_02771	Pre-mRNA-splicing factor slt11. (375 aa)
	A1O3_00669	WD_REPEATS_REGION domain-containing protein. (343 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_00175	A1O3_00432	W9YPM2	W9YG94	Uncharacterized protein.	PPIase cyclophilin-type domain-containing protein.	0.804
A1O3_00175	A1O3_01121	W9YPM2	W9ZDH5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.617
A1O3_00175	A1O3_01330	W9YPM2	W9YJP5	Uncharacterized protein.	Cyclohexanone monooxygenase.	0.988
A1O3_00175	A1O3_01620	W9YPM2	W9ZEY3	Uncharacterized protein.	Uncharacterized protein.	0.951
A1O3_00175	A1O3_01690	W9YPM2	W9YKP4	Uncharacterized protein.	Uncharacterized protein.	0.967
A1O3_00175	A1O3_01915	W9YPM2	W9YHZ5	Uncharacterized protein.	SF3b1 domain-containing protein.	0.621
A1O3_00175	A1O3_02264	W9YPM2	W9Y9I7	Uncharacterized protein.	Uncharacterized protein.	0.987
A1O3_00175	A1O3_02771	W9YPM2	W9Z5C7	Uncharacterized protein.	Pre-mRNA-splicing factor slt11.	0.948
A1O3_00175	A1O3_03484	W9YPM2	W9Y218	Uncharacterized protein.	Small nuclear ribonucleoprotein F.	0.906
A1O3_00175	A1O3_03538	W9YPM2	W9YAB0	Uncharacterized protein.	Uncharacterized protein.	0.667
A1O3_00175	A1O3_03821	W9YPM2	W9Y263	Uncharacterized protein.	PSP domain-containing protein.	0.596
A1O3_00175	A1O3_04096	W9YPM2	W9Y3Q3	Uncharacterized protein.	MPN domain-containing protein.	0.956
A1O3_00175	A1O3_04825	W9YPM2	W9XV95	Uncharacterized protein.	Pre-mRNA-splicing factor syf1.	0.989
A1O3_00175	A1O3_04982	W9YPM2	W9Y3T2	Uncharacterized protein.	Pre-mRNA-splicing factor prp46.	0.989
A1O3_00175	A1O3_05180	W9YPM2	W9Y5M2	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.797
A1O3_00175	A1O3_05211	W9YPM2	W9XVF8	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.905
A1O3_00175	A1O3_05575	W9YPM2	W9Y5L2	Uncharacterized protein.	Uncharacterized protein.	0.624
A1O3_00175	A1O3_05620	W9YPM2	W9Y5P6	Uncharacterized protein.	Uncharacterized protein.	0.907
A1O3_00175	A1O3_05783	W9YPM2	W9XXY7	Uncharacterized protein.	Uncharacterized protein.	0.802
A1O3_00175	A1O3_05946	W9YPM2	W9Y7N7	Uncharacterized protein.	Matrin-type domain-containing protein.	0.653