87 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_09323	PLK protein kinase. (1048 aa)
	A1O3_08598	Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1197 aa)
	A1O3_08708	40S ribosomal protein S28. (68 aa)
	A1O3_07104	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (215 aa)
	A1O3_04750	Elongation factor 2. (1089 aa)
	A1O3_04765	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (248 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (101 aa)
	A1O3_04995	Spindle pole body component. (769 aa)
	A1O3_05527	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1151 aa)
	A1O3_05333	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (119 aa)
	A1O3_05378	Uncharacterized protein. (447 aa)
	A1O3_05486	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (432 aa)
	A1O3_05892	Uncharacterized protein. (265 aa)
	A1O3_05608	Phospholipid:diacylglycerol acyltransferase. (639 aa)
	A1O3_05973	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (341 aa)
	A1O3_06640	Brix domain-containing protein. (453 aa)
	A1O3_06249	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (309 aa)
	A1O3_03525	Uncharacterized protein. (341 aa)
	A1O3_06848	Uncharacterized protein. (427 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
	A1O3_03536	RP/EB family microtubule-associated protein. (247 aa)
	A1O3_03926	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	A1O3_03922	Uncharacterized protein. (406 aa)
	A1O3_04261	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (859 aa)
	A1O3_10091	Uncharacterized protein. (181 aa)
	A1O3_04837	Uncharacterized protein. (1803 aa)
	A1O3_04076	TTK protein kinase. (801 aa)
	A1O3_04942	Uncharacterized protein. (476 aa)
	A1O3_09640	LsmAD domain-containing protein. (1002 aa)
	A1O3_05504	Exonuclease domain-containing protein. (311 aa)
	A1O3_01952	Uncharacterized protein. (1276 aa)
	A1O3_02609	Non-specific serine/threonine protein kinase. (871 aa)
	A1O3_02854	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family. (510 aa)
	A1O3_03115	Uncharacterized protein. (309 aa)
	A1O3_02790	Spindle pole body component. (947 aa)
	A1O3_03156	Uncharacterized protein. (769 aa)
	A1O3_08330	Uncharacterized protein. (451 aa)
	A1O3_04049	Valyl-tRNA synthetase. (440 aa)
	A1O3_04300	Uncharacterized protein. (311 aa)
	A1O3_00020	Zn(2)-C6 fungal-type domain-containing protein. (669 aa)
	A1O3_00001	F-box domain-containing protein. (354 aa)
	A1O3_00011	Uncharacterized protein. (1482 aa)
	A1O3_00612	CENP-T_C domain-containing protein. (507 aa)
	A1O3_00383	Zn(2)-C6 fungal-type domain-containing protein. (719 aa)
	A1O3_02109	Uncharacterized protein. (330 aa)
	A1O3_02139	Ribosomal_S7 domain-containing protein. (364 aa)
	A1O3_00588	26S proteasome regulatory subunit rpn11. (341 aa)
	A1O3_02361	60S ribosomal protein L10-A. (223 aa)
	A1O3_03057	40S ribosomal protein S19. (154 aa)
	A1O3_06508	Translation initiation factor 5. (424 aa)
	A1O3_04791	PAT1 domain-containing protein. (823 aa)
	A1O3_00205	Spindle pole body component. (902 aa)
	A1O3_05001	Uncharacterized protein. (901 aa)
	A1O3_00595	Uncharacterized protein. (520 aa)
	A1O3_01147	Uncharacterized protein. (840 aa)
	A1O3_01313	Uncharacterized protein. (393 aa)
	A1O3_01430	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (248 aa)
	A1O3_01823	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (342 aa)
	A1O3_01893	Uncharacterized protein. (311 aa)
	A1O3_02213	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4853 aa)
	A1O3_02254	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
	A1O3_03031	Uncharacterized protein. (122 aa)
	A1O3_00002	Brix domain-containing protein. (336 aa)
	A1O3_00122	Uncharacterized protein. (587 aa)
	A1O3_00639	WD_REPEATS_REGION domain-containing protein. (890 aa)
	A1O3_01191	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
	A1O3_07816	Uncharacterized protein. (271 aa)
	A1O3_08172	Non-specific serine/threonine protein kinase. (894 aa)
	A1O3_08243	CP-type G domain-containing protein. (671 aa)
	A1O3_08348	Uncharacterized protein. (645 aa)
	A1O3_08173	Uncharacterized protein. (463 aa)
	A1O3_08264	Large subunit ribosomal protein L23Ae. (155 aa)
	A1O3_08329	Uncharacterized protein. (68 aa)
	A1O3_10443	60S ribosomal protein L5. (301 aa)
	A1O3_10516	Uncharacterized protein. (301 aa)
	A1O3_10148	Uncharacterized protein. (436 aa)
	A1O3_10354	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (455 aa)
	A1O3_07345	Spindle pole body component. (911 aa)
	A1O3_07149	Uncharacterized protein. (787 aa)
	A1O3_06126	Uncharacterized protein. (96 aa)
	A1O3_08902	Zn(2)-C6 fungal-type domain-containing protein. (726 aa)
	A1O3_08717	WD_REPEATS_REGION domain-containing protein. (525 aa)
	A1O3_07859	Uncharacterized protein. (801 aa)
	A1O3_06800	Uncharacterized protein. (175 aa)
	A1O3_10487	Uncharacterized protein. (585 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (90 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_00001	A1O3_00002	W9YG06	W9ZAB3	F-box domain-containing protein.	Brix domain-containing protein.	0.478
A1O3_00001	A1O3_00639	W9YG06	W9ZC48	F-box domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.733
A1O3_00001	A1O3_01191	W9YG06	W9ZDP3	F-box domain-containing protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.798
A1O3_00001	A1O3_01823	W9YG06	W9Z2L8	F-box domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.690
A1O3_00001	A1O3_02254	W9YG06	W9Z3V2	F-box domain-containing protein.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.985
A1O3_00001	A1O3_02854	W9YG06	W9YAA9	F-box domain-containing protein.	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.	0.405
A1O3_00001	A1O3_03156	W9YG06	W9YB50	F-box domain-containing protein.	Uncharacterized protein.	0.671
A1O3_00001	A1O3_03525	W9YG06	W9Y183	F-box domain-containing protein.	Uncharacterized protein.	0.638
A1O3_00001	A1O3_04049	W9YG06	W9YCV8	F-box domain-containing protein.	Valyl-tRNA synthetase.	0.960
A1O3_00001	A1O3_04765	W9YG06	W9XV36	F-box domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.979
A1O3_00001	A1O3_04837	W9YG06	W9Y3E7	F-box domain-containing protein.	Uncharacterized protein.	0.929
A1O3_00001	A1O3_05486	W9YG06	W9XX48	F-box domain-containing protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.710
A1O3_00001	A1O3_05504	W9YG06	W9Y6J6	F-box domain-containing protein.	Exonuclease domain-containing protein.	0.437
A1O3_00001	A1O3_06249	W9YG06	W9XZP7	F-box domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.892
A1O3_00001	A1O3_06508	W9YG06	W9YKA1	F-box domain-containing protein.	Translation initiation factor 5.	0.420
A1O3_00001	A1O3_06640	W9YG06	W9XZM0	F-box domain-containing protein.	Brix domain-containing protein.	0.879
A1O3_00001	A1O3_07859	W9YG06	W9XQH6	F-box domain-containing protein.	Uncharacterized protein.	0.663
A1O3_00001	A1O3_08243	W9YG06	W9XHH4	F-box domain-containing protein.	CP-type G domain-containing protein.	0.856
A1O3_00001	A1O3_08264	W9YG06	W9XIF0	F-box domain-containing protein.	Large subunit ribosomal protein L23Ae.	0.827
A1O3_00001	A1O3_08717	W9YG06	W9XQG1	F-box domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.592