32 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_01975	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	A1O3_02347	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
	A1O3_02962	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (413 aa)
	A1O3_00109	Metallophos domain-containing protein. (447 aa)
	A1O3_05426	Serine/threonine-protein phosphatase. (329 aa)
	A1O3_00591	STE/STE7 protein kinase. (672 aa)
	A1O3_05959	BZIP domain-containing protein. (252 aa)
	A1O3_01672	TYR_PHOSPHATASE_2 domain-containing protein. (421 aa)
	A1O3_01918	Uncharacterized protein. (533 aa)
	A1O3_02370	Uncharacterized protein. (192 aa)
	A1O3_03880	NACHT domain-containing protein. (1085 aa)
	A1O3_03060	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (357 aa)
	A1O3_03549	Uncharacterized protein. (584 aa)
	A1O3_03337	C2H2-type domain-containing protein. (281 aa)
	A1O3_02869	Uncharacterized protein. (412 aa)
	A1O3_03341	Uncharacterized protein. (261 aa)
	A1O3_02022	Uncharacterized protein. (215 aa)
	A1O3_05630	STE/STE7/MEK1 protein kinase. (542 aa)
	A1O3_05442	BZIP domain-containing protein. (346 aa)
	A1O3_10222	Uncharacterized protein. (686 aa)
	A1O3_03851	Uncharacterized protein. (233 aa)
	A1O3_05419	Uncharacterized protein. (522 aa)
	A1O3_05020	EF-hand domain-containing protein. (240 aa)
	A1O3_04950	Uncharacterized protein. (582 aa)
	A1O3_06940	APH domain-containing protein. (308 aa)
	A1O3_08657	Uncharacterized protein. (169 aa)
	A1O3_07543	STE/STE7/MKK protein kinase; Belongs to the protein kinase superfamily. (491 aa)
	A1O3_07488	Protein phosphatase 2 (Formerly 2A), regulatory subunit A. (621 aa)
	A1O3_07522	Uncharacterized protein. (719 aa)
	A1O3_08167	Uncharacterized protein. (627 aa)
	A1O3_00343	Uncharacterized protein. (229 aa)
	A1O3_01925	Activating transcription factor, other eukaryote. (524 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_00109	A1O3_00591	W9YQM3	W9YS08	Metallophos domain-containing protein.	STE/STE7 protein kinase.	0.569
A1O3_00109	A1O3_01975	W9YQM3	W9YI46	Metallophos domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.666
A1O3_00109	A1O3_02347	W9YQM3	W9YJ51	Metallophos domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.669
A1O3_00109	A1O3_02370	W9YQM3	W9Z463	Metallophos domain-containing protein.	Uncharacterized protein.	0.401
A1O3_00109	A1O3_02962	W9YQM3	W9YJQ3	Metallophos domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.669
A1O3_00109	A1O3_03060	W9YQM3	W9YBV9	Metallophos domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.669
A1O3_00109	A1O3_03337	W9YQM3	W9YAY0	Metallophos domain-containing protein.	C2H2-type domain-containing protein.	0.401
A1O3_00109	A1O3_03851	W9YQM3	W9Y284	Metallophos domain-containing protein.	Uncharacterized protein.	0.401
A1O3_00109	A1O3_05020	W9YQM3	W9XVX0	Metallophos domain-containing protein.	EF-hand domain-containing protein.	0.401
A1O3_00109	A1O3_05630	W9YQM3	W9Y5Q2	Metallophos domain-containing protein.	STE/STE7/MEK1 protein kinase.	0.569
A1O3_00109	A1O3_05959	W9YQM3	W9YSM3	Metallophos domain-containing protein.	BZIP domain-containing protein.	0.666
A1O3_00109	A1O3_07488	W9YQM3	W9XLV1	Metallophos domain-containing protein.	Protein phosphatase 2 (Formerly 2A), regulatory subunit A.	0.980
A1O3_00109	A1O3_07522	W9YQM3	W9XL18	Metallophos domain-containing protein.	Uncharacterized protein.	0.401
A1O3_00109	A1O3_07543	W9YQM3	W9XLZ9	Metallophos domain-containing protein.	STE/STE7/MKK protein kinase; Belongs to the protein kinase superfamily.	0.569
A1O3_00109	A1O3_08167	W9YQM3	W9XHB2	Metallophos domain-containing protein.	Uncharacterized protein.	0.669
A1O3_00109	A1O3_08657	W9YQM3	W9XQ94	Metallophos domain-containing protein.	Uncharacterized protein.	0.669
A1O3_00343	A1O3_01918	W9YGW4	W9Z2Z3	Uncharacterized protein.	Uncharacterized protein.	0.663
A1O3_00343	A1O3_02347	W9YGW4	W9YJ51	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.782
A1O3_00343	A1O3_02962	W9YGW4	W9YJQ3	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.782
A1O3_00343	A1O3_03060	W9YGW4	W9YBV9	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.782