10 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_07339	Uncharacterized protein. (1126 aa)
	A1O3_07635	Uncharacterized protein. (622 aa)
	A1O3_05209	Uncharacterized protein. (1338 aa)
	A1O3_05351	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (758 aa)
	A1O3_03482	Uncharacterized protein. (1471 aa)
	A1O3_03152	Uncharacterized protein. (450 aa)
	A1O3_00642	Uncharacterized protein. (291 aa)
	A1O3_01975	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	A1O3_06022	Uncharacterized protein. (521 aa)
	A1O3_05959	BZIP domain-containing protein. (252 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_00642	A1O3_03152	W9YGR5	W9YC34	Uncharacterized protein.	Uncharacterized protein.	0.752
A1O3_00642	A1O3_03482	W9YGR5	W9YBA4	Uncharacterized protein.	Uncharacterized protein.	0.647
A1O3_00642	A1O3_05209	W9YGR5	W9Y4G5	Uncharacterized protein.	Uncharacterized protein.	0.647
A1O3_01975	A1O3_03152	W9YI46	W9YC34	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.573
A1O3_01975	A1O3_03482	W9YI46	W9YBA4	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.548
A1O3_01975	A1O3_05209	W9YI46	W9Y4G5	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.548
A1O3_01975	A1O3_05351	W9YI46	W9Y625	Ubiquitin-40S ribosomal protein S27a.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.735
A1O3_03152	A1O3_00642	W9YC34	W9YGR5	Uncharacterized protein.	Uncharacterized protein.	0.752
A1O3_03152	A1O3_01975	W9YC34	W9YI46	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.573
A1O3_03152	A1O3_05959	W9YC34	W9YSM3	Uncharacterized protein.	BZIP domain-containing protein.	0.573
A1O3_03152	A1O3_07339	W9YC34	W9XVM3	Uncharacterized protein.	Uncharacterized protein.	0.752
A1O3_03152	A1O3_07635	W9YC34	W9XVK5	Uncharacterized protein.	Uncharacterized protein.	0.862
A1O3_03482	A1O3_00642	W9YBA4	W9YGR5	Uncharacterized protein.	Uncharacterized protein.	0.647
A1O3_03482	A1O3_01975	W9YBA4	W9YI46	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.548
A1O3_03482	A1O3_05959	W9YBA4	W9YSM3	Uncharacterized protein.	BZIP domain-containing protein.	0.548
A1O3_03482	A1O3_07339	W9YBA4	W9XVM3	Uncharacterized protein.	Uncharacterized protein.	0.729
A1O3_05209	A1O3_00642	W9Y4G5	W9YGR5	Uncharacterized protein.	Uncharacterized protein.	0.647
A1O3_05209	A1O3_01975	W9Y4G5	W9YI46	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.548
A1O3_05209	A1O3_05959	W9Y4G5	W9YSM3	Uncharacterized protein.	BZIP domain-containing protein.	0.548
A1O3_05209	A1O3_07339	W9Y4G5	W9XVM3	Uncharacterized protein.	Uncharacterized protein.	0.732