33 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_02636	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
	A1O3_04590	HAL protein kinase. (516 aa)
	A1O3_04384	CAMK/CAMKL/CHK1 protein kinase. (540 aa)
	A1O3_01673	HAL protein kinase; Belongs to the protein kinase superfamily. (465 aa)
	A1O3_01607	Asparaginyl-tRNA synthetase. (572 aa)
	A1O3_05959	BZIP domain-containing protein. (252 aa)
	A1O3_05071	Uncharacterized protein. (237 aa)
	A1O3_05036	HAL protein kinase. (753 aa)
	A1O3_06786	Crossover junction endonuclease MUS81. (617 aa)
	A1O3_01589	Bloom syndrome protein. (1534 aa)
	A1O3_03042	DUF1767 domain-containing protein. (296 aa)
	A1O3_01975	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	A1O3_06938	RECA_2 domain-containing protein. (473 aa)
	A1O3_07793	Uncharacterized protein. (166 aa)
	A1O3_03312	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (507 aa)
	A1O3_01896	Rad51 domain-containing protein. (428 aa)
	A1O3_09595	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (625 aa)
	A1O3_10531	Helicase C-terminal domain-containing protein. (284 aa)
	A1O3_03671	XPGI domain-containing protein. (794 aa)
	A1O3_03615	RAN protein kinase; Belongs to the protein kinase superfamily. (414 aa)
	A1O3_06078	Helicase ATP-binding domain-containing protein. (382 aa)
	A1O3_05952	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (349 aa)
	A1O3_05543	ERCC4 domain-containing protein. (662 aa)
	A1O3_04694	Uncharacterized protein. (506 aa)
	A1O3_08111	Uncharacterized protein. (365 aa)
	A1O3_06869	Uncharacterized protein. (196 aa)
	A1O3_06095	Uncharacterized protein. (109 aa)
	A1O3_07452	Uncharacterized protein. (954 aa)
	SLX1	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (412 aa)
	A1O3_10469	Helicase ATP-binding domain-containing protein. (603 aa)
	A1O3_08359	RECA_2 domain-containing protein. (448 aa)
	A1O3_09051	zf-GRF domain-containing protein. (334 aa)
	A1O3_10470	Helicase C-terminal domain-containing protein. (140 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_01589	A1O3_01607	W9YKF3	W9YUW5	Bloom syndrome protein.	Asparaginyl-tRNA synthetase.	0.590
A1O3_01589	A1O3_01673	W9YKF3	W9YV21	Bloom syndrome protein.	HAL protein kinase; Belongs to the protein kinase superfamily.	0.451
A1O3_01589	A1O3_01896	W9YKF3	W9Y7N8	Bloom syndrome protein.	Rad51 domain-containing protein.	0.623
A1O3_01589	A1O3_01975	W9YKF3	W9YI46	Bloom syndrome protein.	Ubiquitin-40S ribosomal protein S27a.	0.470
A1O3_01589	A1O3_02636	W9YKF3	W9Z500	Bloom syndrome protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.870
A1O3_01589	A1O3_03042	W9YKF3	W9YJX3	Bloom syndrome protein.	DUF1767 domain-containing protein.	0.866
A1O3_01589	A1O3_03671	W9YKF3	W9Y2I3	Bloom syndrome protein.	XPGI domain-containing protein.	0.677
A1O3_01589	A1O3_04384	W9YKF3	W9YYR2	Bloom syndrome protein.	CAMK/CAMKL/CHK1 protein kinase.	0.675
A1O3_01589	A1O3_04590	W9YKF3	W9YZB0	Bloom syndrome protein.	HAL protein kinase.	0.451
A1O3_01589	A1O3_04694	W9YKF3	W9XU01	Bloom syndrome protein.	Uncharacterized protein.	0.559
A1O3_01589	A1O3_05036	W9YKF3	W9YQ47	Bloom syndrome protein.	HAL protein kinase.	0.451
A1O3_01589	A1O3_05543	W9YKF3	W9XXC9	Bloom syndrome protein.	ERCC4 domain-containing protein.	0.659
A1O3_01589	A1O3_05952	W9YKF3	W9XXJ7	Bloom syndrome protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.889
A1O3_01589	A1O3_05959	W9YKF3	W9YSM3	Bloom syndrome protein.	BZIP domain-containing protein.	0.470
A1O3_01589	A1O3_06786	W9YKF3	W9YL26	Bloom syndrome protein.	Crossover junction endonuclease MUS81.	0.831
A1O3_01589	A1O3_06938	W9YKF3	W9YEB4	Bloom syndrome protein.	RECA_2 domain-containing protein.	0.768
A1O3_01589	A1O3_07452	W9YKF3	W9XKV5	Bloom syndrome protein.	Uncharacterized protein.	0.548
A1O3_01589	A1O3_08111	W9YKF3	W9XS62	Bloom syndrome protein.	Uncharacterized protein.	0.738
A1O3_01589	A1O3_08359	W9YKF3	W9XIM9	Bloom syndrome protein.	RECA_2 domain-containing protein.	0.846
A1O3_01589	A1O3_09051	W9YKF3	W9XBQ0	Bloom syndrome protein.	zf-GRF domain-containing protein.	0.738