19 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_02636	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
	A1O3_09749	DNA excision repair protein ERCC-1. (373 aa)
	A1O3_09559	Uncharacterized protein. (164 aa)
	A1O3_08738	DNA polymerase kappa subunit. (689 aa)
	A1O3_08268	E3 ubiquitin-protein ligase RBX1. (125 aa)
	A1O3_06820	Uncharacterized protein. (563 aa)
	A1O3_04694	Uncharacterized protein. (506 aa)
	A1O3_07717	DNA excision repair protein ERCC-5. (1309 aa)
	A1O3_03294	DNA excision repair protein ERCC-4. (943 aa)
	A1O3_04972	CBFD_NFYB_HMF domain-containing protein. (187 aa)
	A1O3_05214	CULLIN_2 domain-containing protein; Belongs to the cullin family. (898 aa)
	A1O3_04594	Poly [ADP-ribose] polymerase. (705 aa)
	A1O3_05356	CPSF_A domain-containing protein. (1152 aa)
	A1O3_01975	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	A1O3_01764	Uncharacterized protein. (375 aa)
	A1O3_05071	Uncharacterized protein. (237 aa)
	A1O3_05213	Uncharacterized protein. (132 aa)
	A1O3_05959	BZIP domain-containing protein. (252 aa)
	A1O3_02320	Zds_C domain-containing protein. (935 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_01764	A1O3_01975	W9YJX2	W9YI46	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.430
A1O3_01764	A1O3_02636	W9YJX2	W9Z500	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.825
A1O3_01764	A1O3_03294	W9YJX2	W9Y1J5	Uncharacterized protein.	DNA excision repair protein ERCC-4.	0.620
A1O3_01764	A1O3_05959	W9YJX2	W9YSM3	Uncharacterized protein.	BZIP domain-containing protein.	0.430
A1O3_01764	A1O3_09749	W9YJX2	W9XAM4	Uncharacterized protein.	DNA excision repair protein ERCC-1.	0.593
A1O3_01975	A1O3_01764	W9YI46	W9YJX2	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.430
A1O3_01975	A1O3_02320	W9YI46	W9Z410	Ubiquitin-40S ribosomal protein S27a.	Zds_C domain-containing protein.	0.430
A1O3_01975	A1O3_02636	W9YI46	W9Z500	Ubiquitin-40S ribosomal protein S27a.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.660
A1O3_01975	A1O3_03294	W9YI46	W9Y1J5	Ubiquitin-40S ribosomal protein S27a.	DNA excision repair protein ERCC-4.	0.690
A1O3_01975	A1O3_04594	W9YI46	W9Y535	Ubiquitin-40S ribosomal protein S27a.	Poly [ADP-ribose] polymerase.	0.700
A1O3_01975	A1O3_04694	W9YI46	W9XU01	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.434
A1O3_01975	A1O3_05213	W9YI46	W9YQK2	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.430
A1O3_01975	A1O3_05214	W9YI46	W9Y4G9	Ubiquitin-40S ribosomal protein S27a.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.784
A1O3_01975	A1O3_05356	W9YI46	W9Y631	Ubiquitin-40S ribosomal protein S27a.	CPSF_A domain-containing protein.	0.778
A1O3_01975	A1O3_06820	W9YI46	W9XS08	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.430
A1O3_01975	A1O3_07717	W9YI46	W9XVR5	Ubiquitin-40S ribosomal protein S27a.	DNA excision repair protein ERCC-5.	0.651
A1O3_01975	A1O3_08268	W9YI46	W9XHJ5	Ubiquitin-40S ribosomal protein S27a.	E3 ubiquitin-protein ligase RBX1.	0.917
A1O3_01975	A1O3_08738	W9YI46	W9XFF4	Ubiquitin-40S ribosomal protein S27a.	DNA polymerase kappa subunit.	0.760
A1O3_01975	A1O3_09559	W9YI46	W9XAV1	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.430
A1O3_01975	A1O3_09749	W9YI46	W9XAM4	Ubiquitin-40S ribosomal protein S27a.	DNA excision repair protein ERCC-1.	0.775