53 items (Capronia epimyces) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O3_01975	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	A1O3_09468	Uncharacterized protein. (801 aa)
	A1O3_08348	Uncharacterized protein. (645 aa)
	A1O3_09631	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (971 aa)
	A1O3_09919	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (165 aa)
	A1O3_09632	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
	A1O3_09637	Ubiquitin-like domain-containing protein. (100 aa)
	A1O3_09732	Uncharacterized protein. (202 aa)
	A1O3_09009	Uncharacterized protein. (421 aa)
	A1O3_07360	Uncharacterized protein. (1365 aa)
	A1O3_07415	Uncharacterized protein. (1120 aa)
	A1O3_09823	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (327 aa)
	A1O3_09357	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	A1O3_08803	Uncharacterized protein. (448 aa)
	A1O3_08391	Nup188_C domain-containing protein. (1824 aa)
	A1O3_06899	Uncharacterized protein. (328 aa)
	A1O3_04779	Uncharacterized protein. (1665 aa)
	A1O3_07656	Uncharacterized protein. (861 aa)
	A1O3_07379	CAP-Gly domain-containing protein. (831 aa)
	A1O3_07409	Uncharacterized protein. (565 aa)
	A1O3_07506	Delta14-sterol reductase. (496 aa)
	A1O3_05323	Uncharacterized protein. (707 aa)
	A1O3_05902	Uncharacterized protein. (272 aa)
	A1O3_06566	Uncharacterized protein. (746 aa)
	A1O3_03536	RP/EB family microtubule-associated protein. (247 aa)
	A1O3_04106	Kinesin family member 18/19; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1027 aa)
	A1O3_04692	Uncharacterized protein. (497 aa)
	A1O3_03980	Peptidase C50 domain-containing protein. (2064 aa)
	A1O3_09565	Uncharacterized protein. (1245 aa)
	A1O3_05280	Uncharacterized protein. (226 aa)
	A1O3_05645	Uncharacterized protein. (221 aa)
	A1O3_01876	ELYS domain-containing protein. (309 aa)
	A1O3_01981	Adenosinetriphosphatase. (807 aa)
	A1O3_02499	Uncharacterized protein. (273 aa)
	A1O3_02359	Uncharacterized protein. (714 aa)
	A1O3_01929	Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family. (436 aa)
	A1O3_02517	Peptidase S59 domain-containing protein. (1946 aa)
	A1O3_00883	Uncharacterized protein. (325 aa)
	A1O3_01210	Importin N-terminal domain-containing protein. (874 aa)
	A1O3_01220	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
	A1O3_06488	Uncharacterized protein. (335 aa)
	A1O3_04671	DOA4-independent degradation protein 4. (220 aa)
	A1O3_05112	Kinetochore protein nuf2. (457 aa)
	A1O3_00109	Metallophos domain-containing protein. (447 aa)
	A1O3_00696	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	A1O3_05874	Uncharacterized protein. (688 aa)
	A1O3_05909	Uncharacterized protein. (1344 aa)
	A1O3_05959	BZIP domain-containing protein. (252 aa)
	A1O3_03657	Mitotic spindle assembly checkpoint protein MAD1. (764 aa)
	A1O3_02038	Uncharacterized protein. (932 aa)
	A1O3_00734	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (450 aa)
	A1O3_01570	NUDE_C domain-containing protein. (616 aa)
	A1O3_01671	Uncharacterized protein. (630 aa)

Your Current Organism:

Capronia epimyces

NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O3_00109	A1O3_01975	W9YQM3	W9YI46	Metallophos domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.666
A1O3_00109	A1O3_02359	W9YQM3	W9Y9U2	Metallophos domain-containing protein.	Uncharacterized protein.	0.400
A1O3_00109	A1O3_03980	W9YQM3	W9Y3F3	Metallophos domain-containing protein.	Peptidase C50 domain-containing protein.	0.772
A1O3_00109	A1O3_05959	W9YQM3	W9YSM3	Metallophos domain-containing protein.	BZIP domain-containing protein.	0.666
A1O3_00696	A1O3_01671	W9YSA4	W9ZF32	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.775
A1O3_00696	A1O3_01929	W9YSA4	W9YGU9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	0.652
A1O3_00696	A1O3_01975	W9YSA4	W9YI46	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Ubiquitin-40S ribosomal protein S27a.	0.425
A1O3_00696	A1O3_01981	W9YSA4	W9Y7W2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Adenosinetriphosphatase.	0.747
A1O3_00696	A1O3_02038	W9YSA4	W9Z3A0	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.853
A1O3_00696	A1O3_02359	W9YSA4	W9Y9U2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.596
A1O3_00696	A1O3_03536	W9YSA4	W9Y262	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	RP/EB family microtubule-associated protein.	0.922
A1O3_00696	A1O3_03657	W9YSA4	W9YWP3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Mitotic spindle assembly checkpoint protein MAD1.	0.527
A1O3_00696	A1O3_04106	W9YSA4	W9Y2W0	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Kinesin family member 18/19; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.823
A1O3_00696	A1O3_05112	W9YSA4	W9YQB0	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Kinetochore protein nuf2.	0.406
A1O3_00696	A1O3_05323	W9YSA4	W9XWN9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.975
A1O3_00696	A1O3_05645	W9YSA4	W9Y5R5	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.674
A1O3_00696	A1O3_05874	W9YSA4	W9YSD9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.464
A1O3_00696	A1O3_05959	W9YSA4	W9YSM3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	BZIP domain-containing protein.	0.425
A1O3_00696	A1O3_06566	W9YSA4	W9Y0I5	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.561
A1O3_00696	A1O3_07379	W9YSA4	W9XVR0	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	CAP-Gly domain-containing protein.	0.755