STRINGSTRING
A1O3_04915 A1O3_04915 A1O3_09559 A1O3_09559 FEN1 FEN1 A1O3_08541 A1O3_08541 A1O3_06196 A1O3_06196 A1O3_06206 A1O3_06206 A1O3_06820 A1O3_06820 A1O3_04694 A1O3_04694 A1O3_04852 A1O3_04852 A1O3_05726 A1O3_05726 A1O3_01325 A1O3_01325 A1O3_01764 A1O3_01764 A1O3_02973 A1O3_02973 A1O3_05071 A1O3_05071 A1O3_05213 A1O3_05213 A1O3_01395 A1O3_01395 A1O3_02320 A1O3_02320 A1O3_02636 A1O3_02636
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O3_04915DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (649 aa)
A1O3_09559Uncharacterized protein. (164 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (413 aa)
A1O3_08541DNA polymerase delta subunit 2. (511 aa)
A1O3_06196Vezatin domain-containing protein. (588 aa)
A1O3_06206Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (228 aa)
A1O3_06820Uncharacterized protein. (563 aa)
A1O3_04694Uncharacterized protein. (506 aa)
A1O3_04852DNA polymerase. (1107 aa)
A1O3_05726DNA replication ATP-dependent helicase Dna2. (1687 aa)
A1O3_01325DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (503 aa)
A1O3_01764Uncharacterized protein. (375 aa)
A1O3_02973DNA primase; Belongs to the eukaryotic-type primase small subunit family. (535 aa)
A1O3_05071Uncharacterized protein. (237 aa)
A1O3_05213Uncharacterized protein. (132 aa)
A1O3_01395DNA polymerase. (1453 aa)
A1O3_02320Zds_C domain-containing protein. (935 aa)
A1O3_02636Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
Your Current Organism:
Capronia epimyces
NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96
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