STRINGSTRING
A1O3_04226 A1O3_04226 A1O3_10385 A1O3_10385 A1O3_10400 A1O3_10400 LSM4 LSM4 A1O3_09648 A1O3_09648 A1O3_09564 A1O3_09564 A1O3_09936 A1O3_09936 LSM8 LSM8 A1O3_09176 A1O3_09176 A1O3_09192 A1O3_09192 A1O3_09127 A1O3_09127 A1O3_09177 A1O3_09177 A1O3_09198 A1O3_09198 A1O3_09259 A1O3_09259 A1O3_09394 A1O3_09394 A1O3_08468 A1O3_08468 A1O3_08639 A1O3_08639 A1O3_08944 A1O3_08944 A1O3_08769 A1O3_08769 A1O3_08775 A1O3_08775 A1O3_07963 A1O3_07963 A1O3_08890 A1O3_08890 A1O3_09596 A1O3_09596 A1O3_09611 A1O3_09611 A1O3_09636 A1O3_09636 A1O3_09879 A1O3_09879 A1O3_09979 A1O3_09979 A1O3_09597 A1O3_09597 A1O3_09039 A1O3_09039 A1O3_07462 A1O3_07462 A1O3_09211 A1O3_09211 A1O3_09246 A1O3_09246 A1O3_07699 A1O3_07699 A1O3_07714 A1O3_07714 A1O3_09155 A1O3_09155 A1O3_09191 A1O3_09191 A1O3_09526 A1O3_09526 A1O3_07638 A1O3_07638 A1O3_06255 A1O3_06255 A1O3_08766 A1O3_08766 A1O3_06380 A1O3_06380 A1O3_06486 A1O3_06486 A1O3_06602 A1O3_06602 A1O3_07914 A1O3_07914 A1O3_08943 A1O3_08943 A1O3_06608 A1O3_06608 A1O3_07915 A1O3_07915 A1O3_08266 A1O3_08266 A1O3_08286 A1O3_08286 A1O3_08292 A1O3_08292 A1O3_08312 A1O3_08312 A1O3_04774 A1O3_04774 A1O3_04944 A1O3_04944 LSM3 LSM3 A1O3_04825 A1O3_04825 A1O3_05211 A1O3_05211 A1O3_07762 A1O3_07762 A1O3_05045 A1O3_05045 A1O3_05090 A1O3_05090 A1O3_05917 A1O3_05917 A1O3_05783 A1O3_05783 A1O3_06143 A1O3_06143 A1O3_06054 A1O3_06054 A1O3_06504 A1O3_06504 A1O3_06524 A1O3_06524 A1O3_06822 A1O3_06822 A1O3_06449 A1O3_06449 A1O3_03313 A1O3_03313 A1O3_03483 A1O3_03483 A1O3_03484 A1O3_03484 A1O3_03536 A1O3_03536 A1O3_03821 A1O3_03821 A1O3_03959 A1O3_03959 A1O3_04031 A1O3_04031 A1O3_04096 A1O3_04096 A1O3_04982 A1O3_04982 A1O3_04192 A1O3_04192 A1O3_04212 A1O3_04212 A1O3_04628 A1O3_04628 A1O3_04743 A1O3_04743 A1O3_04773 A1O3_04773 A1O3_04823 A1O3_04823 A1O3_04448 A1O3_04448 A1O3_04498 A1O3_04498 A1O3_05365 A1O3_05365 A1O3_04958 A1O3_04958 A1O3_09893 A1O3_09893 A1O3_05620 A1O3_05620 A1O3_05625 A1O3_05625 A1O3_05281 A1O3_05281 A1O3_05489 A1O3_05489 A1O3_09380 A1O3_09380 A1O3_01856 A1O3_01856 A1O3_05946 A1O3_05946 A1O3_02278 A1O3_02278 A1O3_02409 A1O3_02409 A1O3_02564 A1O3_02564 A1O3_02264 A1O3_02264 A1O3_02654 A1O3_02654 A1O3_03538 A1O3_03538 A1O3_02630 A1O3_02630 A1O3_02775 A1O3_02775 A1O3_03849 A1O3_03849 A1O3_03020 A1O3_03020 A1O3_04304 A1O3_04304 A1O3_04365 A1O3_04365 A1O3_04420 A1O3_04420 A1O3_04460 A1O3_04460 A1O3_06963 A1O3_06963 A1O3_07058 A1O3_07058 A1O3_07197 A1O3_07197 A1O3_07433 A1O3_07433 A1O3_00317 A1O3_00317 A1O3_00432 A1O3_00432 A1O3_00457 A1O3_00457 A1O3_00547 A1O3_00547 A1O3_07680 A1O3_07680 A1O3_00717 A1O3_00717 A1O3_02129 A1O3_02129 A1O3_00618 A1O3_00618 A1O3_01915 A1O3_01915 A1O3_02772 A1O3_02772 A1O3_02443 A1O3_02443 A1O3_01280 A1O3_01280 A1O3_02608 A1O3_02608 A1O3_04746 A1O3_04746 A1O3_04966 A1O3_04966 A1O3_00365 A1O3_00365 A1O3_00296 A1O3_00296 A1O3_00855 A1O3_00855 A1O3_00446 A1O3_00446 A1O3_00910 A1O3_00910 A1O3_00546 A1O3_00546 A1O3_01272 A1O3_01272 A1O3_01048 A1O3_01048 A1O3_01571 A1O3_01571 A1O3_01390 A1O3_01390 A1O3_03280 A1O3_03280 A1O3_03748 A1O3_03748 A1O3_01863 A1O3_01863 A1O3_02506 A1O3_02506 A1O3_02771 A1O3_02771 A1O3_02826 A1O3_02826 A1O3_00194 A1O3_00194 A1O3_01121 A1O3_01121 A1O3_01423 A1O3_01423 A1O3_01620 A1O3_01620
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O3_04226SFM domain-containing protein. (380 aa)
A1O3_10385ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family. (400 aa)
A1O3_10400Matrin-type domain-containing protein. (532 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (90 aa)
A1O3_09648WD_REPEATS_REGION domain-containing protein. (347 aa)
A1O3_09564Uncharacterized protein. (793 aa)
A1O3_09936Uncharacterized protein. (685 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A1O3_09176Uncharacterized protein. (188 aa)
A1O3_09192Heat shock protein SSB1; Belongs to the heat shock protein 70 family. (614 aa)
A1O3_09127Phosducin domain-containing protein. (245 aa)
A1O3_09177Uncharacterized protein. (404 aa)
A1O3_09198Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (158 aa)
A1O3_09259Cation_ATPase_N domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1124 aa)
A1O3_09394U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A1O3_08468Small nuclear ribonucleoprotein B and B. (227 aa)
A1O3_08639Sm domain-containing protein. (130 aa)
A1O3_08944Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1411 aa)
A1O3_08769Ubiquitin thiolesterase. (585 aa)
A1O3_08775U6 snRNA-associated Sm-like protein LSm6. (91 aa)
A1O3_07963RRM domain-containing protein. (249 aa)
A1O3_08890Uncharacterized protein. (1125 aa)
A1O3_09596Nop domain-containing protein. (600 aa)
A1O3_09611Pre-mRNA-splicing factor clf1. (677 aa)
A1O3_09636Uncharacterized protein. (183 aa)
A1O3_09879Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A1O3_09979Uncharacterized protein. (511 aa)
A1O3_09597Mago nashi protein. (172 aa)
A1O3_09039Adenosinetriphosphatase. (981 aa)
A1O3_07462Uncharacterized protein. (473 aa)
A1O3_09211Adenosinetriphosphatase. (992 aa)
A1O3_09246Serine/threonine-protein kinase PRP4. (502 aa)
A1O3_07699Pre-mRNA-splicing ATP-dependent RNA helicase PRP28. (830 aa)
A1O3_07714Sm domain-containing protein. (117 aa)
A1O3_09155CVNH domain-containing protein. (405 aa)
A1O3_09191Elongation factor 2. (982 aa)
A1O3_09526RRM domain-containing protein. (167 aa)
A1O3_07638RRM domain-containing protein. (195 aa)
A1O3_06255Uncharacterized protein. (659 aa)
A1O3_08766G-patch_2 domain-containing protein. (454 aa)
A1O3_06380Endo-1,3(4)-beta-glucanase. (398 aa)
A1O3_06486Uncharacterized protein. (945 aa)
A1O3_06602Uncharacterized protein. (469 aa)
A1O3_07914Uncharacterized protein. (838 aa)
A1O3_08943Uncharacterized protein. (722 aa)
A1O3_06608C2H2-type domain-containing protein. (217 aa)
A1O3_07915Uncharacterized protein. (338 aa)
A1O3_08266Uncharacterized protein. (155 aa)
A1O3_08286ATP-dependent RNA helicase sub2. (441 aa)
A1O3_08292Uncharacterized protein. (204 aa)
A1O3_08312Uncharacterized protein. (286 aa)
A1O3_04774Uncharacterized protein. (423 aa)
A1O3_04944Uncharacterized protein. (1047 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (101 aa)
A1O3_04825Pre-mRNA-splicing factor syf1. (861 aa)
A1O3_05211Small nuclear ribonucleoprotein Sm D2. (75 aa)
A1O3_07762WD_REPEATS_REGION domain-containing protein. (590 aa)
A1O3_05045Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (765 aa)
A1O3_05090Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
A1O3_05917Uncharacterized protein. (1176 aa)
A1O3_05783Uncharacterized protein. (304 aa)
A1O3_06143APH domain-containing protein. (440 aa)
A1O3_06054Slu7 domain-containing protein. (501 aa)
A1O3_06504Nuclear cap-binding protein subunit 2. (178 aa)
A1O3_06524Tudor domain-containing protein. (293 aa)
A1O3_06822CID domain-containing protein. (861 aa)
A1O3_06449Peptidylprolyl isomerase. (156 aa)
A1O3_03313Uncharacterized protein. (665 aa)
A1O3_03483Uncharacterized protein. (119 aa)
A1O3_03484Small nuclear ribonucleoprotein F. (78 aa)
A1O3_03536RP/EB family microtubule-associated protein. (247 aa)
A1O3_03821PSP domain-containing protein. (592 aa)
A1O3_03959Uncharacterized protein. (646 aa)
A1O3_04031Uncharacterized protein. (664 aa)
A1O3_04096MPN domain-containing protein. (2506 aa)
A1O3_04982Pre-mRNA-splicing factor prp46. (439 aa)
A1O3_04192Uncharacterized protein. (824 aa)
A1O3_04212WD_REPEATS_REGION domain-containing protein. (1560 aa)
A1O3_04628Uncharacterized protein. (289 aa)
A1O3_04743Pre-mRNA-processing factor 19. (465 aa)
A1O3_04773Small nuclear ribonucleoprotein Sm D3. (116 aa)
A1O3_04823Uncharacterized protein. (252 aa)
A1O3_04448Pre-mRNA-splicing factor rse1. (1210 aa)
A1O3_04498Uncharacterized protein. (798 aa)
A1O3_05365Uncharacterized protein. (611 aa)
A1O3_04958Adenosinetriphosphatase. (1230 aa)
A1O3_09893Uncharacterized protein; Belongs to the heat shock protein 70 family. (578 aa)
A1O3_05620Uncharacterized protein. (210 aa)
A1O3_05625Zn(2)-C6 fungal-type domain-containing protein. (724 aa)
A1O3_05281RRM domain-containing protein. (272 aa)
A1O3_05489Pre-mRNA-splicing factor cef1. (780 aa)
A1O3_09380RRM domain-containing protein. (294 aa)
A1O3_01856U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (182 aa)
A1O3_05946Matrin-type domain-containing protein. (239 aa)
A1O3_02278U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (572 aa)
A1O3_02409Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (132 aa)
A1O3_02564Uncharacterized protein. (489 aa)
A1O3_02264Uncharacterized protein. (313 aa)
A1O3_02654Uncharacterized protein; Belongs to the DEAD box helicase family. (512 aa)
A1O3_03538Uncharacterized protein. (525 aa)
A1O3_02630Pre-mRNA-splicing factor ini1. (110 aa)
A1O3_02775Uncharacterized protein. (191 aa)
A1O3_03849RRM domain-containing protein. (203 aa)
A1O3_03020RRM domain-containing protein. (199 aa)
A1O3_04304DUF1716 domain-containing protein. (606 aa)
A1O3_04365Uncharacterized protein. (209 aa)
A1O3_04420Uncharacterized protein. (190 aa)
A1O3_04460Small nuclear ribonucleoprotein. (138 aa)
A1O3_06963Uncharacterized protein. (2222 aa)
A1O3_07058Small nuclear ribonucleoprotein G. (80 aa)
A1O3_07197SNRNP27 domain-containing protein. (247 aa)
A1O3_07433Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
A1O3_00317CID domain-containing protein. (383 aa)
A1O3_00432PPIase cyclophilin-type domain-containing protein. (576 aa)
A1O3_00457U2 small nuclear ribonucleoprotein A. (248 aa)
A1O3_00547Uncharacterized protein. (438 aa)
A1O3_07680Uncharacterized protein. (582 aa)
A1O3_00717Uncharacterized protein. (713 aa)
A1O3_02129F-box domain-containing protein. (627 aa)
A1O3_00618Pre-mRNA-splicing factor isy1. (253 aa)
A1O3_01915SF3b1 domain-containing protein. (1232 aa)
A1O3_02772Uncharacterized protein. (109 aa)
A1O3_02443Uncharacterized protein. (963 aa)
A1O3_01280Uncharacterized protein. (2310 aa)
A1O3_02608Uncharacterized protein. (663 aa)
A1O3_04746RRM domain-containing protein. (480 aa)
A1O3_04966G-patch domain-containing protein. (254 aa)
A1O3_00365Endo-1,3(4)-beta-glucanase. (364 aa)
A1O3_00296Pre-mRNA-processing protein 45. (587 aa)
A1O3_00855Uncharacterized protein. (243 aa)
A1O3_00446Uncharacterized protein. (973 aa)
A1O3_00910Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
A1O3_00546Uncharacterized protein. (638 aa)
A1O3_01272SAP domain-containing protein. (642 aa)
A1O3_01048Uncharacterized protein. (566 aa)
A1O3_01571RRM domain-containing protein. (116 aa)
A1O3_01390ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (534 aa)
A1O3_03280Uncharacterized protein. (1040 aa)
A1O3_03748Uncharacterized protein. (587 aa)
A1O3_01863Splicing factor subunit; Belongs to the SF3B5 family. (85 aa)
A1O3_02506Uncharacterized protein. (1296 aa)
A1O3_02771Pre-mRNA-splicing factor slt11. (375 aa)
A1O3_02826G-patch domain-containing protein. (776 aa)
A1O3_00194Hsp70-like protein; Belongs to the heat shock protein 70 family. (648 aa)
A1O3_01121WD_REPEATS_REGION domain-containing protein. (359 aa)
A1O3_01423Uncharacterized protein. (764 aa)
A1O3_01620Uncharacterized protein. (232 aa)
Your Current Organism:
Capronia epimyces
NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96
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