34 items (Cladophialophora psammophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O5_10616	Uncharacterized protein. (140 aa)
	A1O5_08471	Ubiquitin carboxyl-terminal hydrolase. (331 aa)
	A1O5_11001	Uncharacterized protein. (379 aa)
	A1O5_06021	IRE protein kinase. (1189 aa)
	A1O5_05039	Uncharacterized protein. (756 aa)
	A1O5_05567	J domain-containing protein. (350 aa)
	A1O5_04580	Uncharacterized protein; Belongs to the BI1 family. (277 aa)
	A1O5_04921	ANK_REP_REGION domain-containing protein. (655 aa)
	A1O5_03293	Uncharacterized protein. (1465 aa)
	A1O5_03449	OTU domain-containing protein. (356 aa)
	A1O5_06555	ATPase_AAA_core domain-containing protein. (483 aa)
	A1O5_02698	Uncharacterized protein. (179 aa)
	A1O5_04371	Fes1 domain-containing protein. (207 aa)
	A1O5_01969	Cell division control protein 48; Belongs to the AAA ATPase family. (819 aa)
	A1O5_04924	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (256 aa)
	A1O5_03742	Uncharacterized protein. (223 aa)
	A1O5_08723	Uncharacterized protein; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (301 aa)
	A1O5_09989	BZIP domain-containing protein. (357 aa)
	A1O5_09891	Uncharacterized protein. (352 aa)
	A1O5_02567	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)
	A1O5_07826	Uncharacterized protein. (763 aa)
	A1O5_07400	Glucose-regulated protein; Belongs to the heat shock protein 70 family. (687 aa)
	A1O5_06790	Uncharacterized protein. (456 aa)
	A1O5_02790	Uncharacterized protein. (420 aa)
	A1O5_02906	PRKCSH domain-containing protein. (475 aa)
	A1O5_12377	Hsp70-like protein; Belongs to the heat shock protein 70 family. (678 aa)
	A1O5_09704	DnaJ like subfamily C member 3. (541 aa)
	A1O5_10424	Hsp98-like protein; Belongs to the ClpA/ClpB family. (930 aa)
	A1O5_12855	Uncharacterized protein. (285 aa)
	A1O5_12321	Uncharacterized protein. (192 aa)
	A1O5_13039	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (471 aa)
	A1O5_12669	Uncharacterized protein. (689 aa)
	A1O5_12728	Uncharacterized protein. (442 aa)
	A1O5_12833	Uncharacterized protein. (1020 aa)

Your Current Organism:

Cladophialophora psammophila

NCBI taxonomy Id: 1182543
Other names: C. psammophila CBS 110553, Cladophialophora psammophila CBS 110553

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O5_01969	A1O5_02906	W9X4Y4	W9XWG9	Cell division control protein 48; Belongs to the AAA ATPase family.	PRKCSH domain-containing protein.	0.945
A1O5_01969	A1O5_03449	W9X4Y4	W9WZP0	Cell division control protein 48; Belongs to the AAA ATPase family.	OTU domain-containing protein.	0.963
A1O5_01969	A1O5_04921	W9X4Y4	W9WW48	Cell division control protein 48; Belongs to the AAA ATPase family.	ANK_REP_REGION domain-containing protein.	0.829
A1O5_01969	A1O5_04924	W9X4Y4	W9X545	Cell division control protein 48; Belongs to the AAA ATPase family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.967
A1O5_01969	A1O5_07400	W9X4Y4	W9XG78	Cell division control protein 48; Belongs to the AAA ATPase family.	Glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.664
A1O5_01969	A1O5_07826	W9X4Y4	W9XEU4	Cell division control protein 48; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.842
A1O5_01969	A1O5_11001	W9X4Y4	W9WL77	Cell division control protein 48; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.970
A1O5_01969	A1O5_12321	W9X4Y4	W9VQC7	Cell division control protein 48; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.931
A1O5_02567	A1O5_09989	W9XBH2	W9X8N6	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	BZIP domain-containing protein.	0.505
A1O5_02790	A1O5_03742	W9XW66	W9X6P3	Uncharacterized protein.	Uncharacterized protein.	0.588
A1O5_02790	A1O5_04371	W9XW66	W9X3L7	Uncharacterized protein.	Fes1 domain-containing protein.	0.577
A1O5_02790	A1O5_05567	W9XW66	W9WU72	Uncharacterized protein.	J domain-containing protein.	0.570
A1O5_02790	A1O5_06021	W9XW66	W9WSW5	Uncharacterized protein.	IRE protein kinase.	0.437
A1O5_02790	A1O5_07400	W9XW66	W9XG78	Uncharacterized protein.	Glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.952
A1O5_02790	A1O5_09704	W9XW66	W9WGL3	Uncharacterized protein.	DnaJ like subfamily C member 3.	0.795
A1O5_02790	A1O5_09989	W9XW66	W9X8N6	Uncharacterized protein.	BZIP domain-containing protein.	0.424
A1O5_02790	A1O5_10424	W9XW66	W9WDT9	Uncharacterized protein.	Hsp98-like protein; Belongs to the ClpA/ClpB family.	0.588
A1O5_02790	A1O5_12377	W9XW66	W9WH41	Uncharacterized protein.	Hsp70-like protein; Belongs to the heat shock protein 70 family.	0.853
A1O5_02790	A1O5_12669	W9XW66	W9VL21	Uncharacterized protein.	Uncharacterized protein.	0.519
A1O5_02790	A1O5_12833	W9XW66	W9VH18	Uncharacterized protein.	Uncharacterized protein.	0.830