50 items (Cladophialophora psammophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O5_07130	Chitinase. (322 aa)
	A1O5_12826	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (1132 aa)
	A1O5_11891	Glycerol-3-phosphate dehydrogenase [NAD(+)]. (430 aa)
	A1O5_12076	Glucosamine-6-phosphate isomerase. (345 aa)
	A1O5_13146	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (750 aa)
	A1O5_11245	N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family. (398 aa)
	A1O5_10769	Uncharacterized protein. (319 aa)
	A1O5_09361	Uncharacterized protein. (354 aa)
	A1O5_07748	Uncharacterized protein. (108 aa)
	A1O5_08048	Amidohydro-rel domain-containing protein. (458 aa)
	A1O5_11082	Uncharacterized protein. (330 aa)
	A1O5_10562	Uncharacterized protein. (561 aa)
	A1O5_06753	Nudix hydrolase domain-containing protein. (478 aa)
	A1O5_10260	Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (510 aa)
	A1O5_10498	Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. (251 aa)
	A1O5_06425	Uncharacterized protein. (330 aa)
	A1O5_09758	Uncharacterized protein. (244 aa)
	A1O5_11986	dUTP pyrophosphatase. (206 aa)
	A1O5_05905	Nudix hydrolase domain-containing protein. (158 aa)
	A1O5_08162	A_deaminase domain-containing protein. (613 aa)
	A1O5_05490	IU_nuc_hydro domain-containing protein. (433 aa)
	A1O5_08308	Glyco_hydro_30 domain-containing protein; Belongs to the glycosyl hydrolase 30 family. (257 aa)
	A1O5_07747	Uncharacterized protein. (808 aa)
	A1O5_04846	Uncharacterized protein; Belongs to the 5'-nucleotidase family. (626 aa)
	A1O5_07103	Uncharacterized protein. (821 aa)
	A1O5_04192	Uncharacterized protein. (319 aa)
	A1O5_03128	Chitinase; Belongs to the glycosyl hydrolase 18 family. (396 aa)
	A1O5_05650	Uncharacterized protein. (360 aa)
	A1O5_02382	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (167 aa)
	A1O5_02713	Choline-sulfatase. (569 aa)
	A1O5_01573	Uncharacterized protein. (314 aa)
	A1O5_01683	Uncharacterized protein. (542 aa)
	A1O5_10770	Uncharacterized protein. (353 aa)
	A1O5_04224	IU_nuc_hydro domain-containing protein. (371 aa)
	A1O5_03989	Deoxyribose-phosphate aldolase. (264 aa)
	A1O5_04024	Glyco_18 domain-containing protein. (380 aa)
	A1O5_04190	Uncharacterized protein. (703 aa)
	A1O5_03602	Uncharacterized protein. (774 aa)
	A1O5_02656	NodB homology domain-containing protein. (368 aa)
	A1O5_01440	Apyrase; Belongs to the GDA1/CD39 NTPase family. (721 aa)
	A1O5_09206	Uncharacterized protein. (333 aa)
	A1O5_01521	IU_nuc_hydro domain-containing protein. (361 aa)
	A1O5_01652	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (336 aa)
	A1O5_08307	Uncharacterized protein. (353 aa)
	A1O5_00198	Uncharacterized protein. (328 aa)
	A1O5_00489	Uncharacterized protein. (195 aa)
	A1O5_00729	RED_N domain-containing protein. (523 aa)
	A1O5_01094	Uncharacterized protein. (506 aa)
	A1O5_04052	Uncharacterized protein. (295 aa)
	A1O5_03260	Uncharacterized protein. (765 aa)

Your Current Organism:

Cladophialophora psammophila

NCBI taxonomy Id: 1182543
Other names: C. psammophila CBS 110553, Cladophialophora psammophila CBS 110553

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O5_00198	A1O5_01652	W9XFH0	W9XDC3	Uncharacterized protein.	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.	0.528
A1O5_00198	A1O5_04052	W9XFH0	W9XRJ3	Uncharacterized protein.	Uncharacterized protein.	0.551
A1O5_00198	A1O5_11082	W9XFH0	W9WMK5	Uncharacterized protein.	Uncharacterized protein.	0.542
A1O5_00489	A1O5_07103	W9XGB1	W9WY96	Uncharacterized protein.	Uncharacterized protein.	0.517
A1O5_00489	A1O5_10260	W9XGB1	W9WNL2	Uncharacterized protein.	Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.517
A1O5_00729	A1O5_02382	W9XGZ8	W9X1L6	RED_N domain-containing protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.771
A1O5_00729	A1O5_04846	W9XGZ8	W9WVZ8	RED_N domain-containing protein.	Uncharacterized protein; Belongs to the 5'-nucleotidase family.	0.679
A1O5_00729	A1O5_08162	W9XGZ8	W9WTP0	RED_N domain-containing protein.	A_deaminase domain-containing protein.	0.597
A1O5_01440	A1O5_04846	W9XBM1	W9WVZ8	Apyrase; Belongs to the GDA1/CD39 NTPase family.	Uncharacterized protein; Belongs to the 5'-nucleotidase family.	0.786
A1O5_01440	A1O5_08162	W9XBM1	W9WTP0	Apyrase; Belongs to the GDA1/CD39 NTPase family.	A_deaminase domain-containing protein.	0.595
A1O5_01521	A1O5_02382	W9XBV4	W9X1L6	IU_nuc_hydro domain-containing protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.725
A1O5_01521	A1O5_04846	W9XBV4	W9WVZ8	IU_nuc_hydro domain-containing protein.	Uncharacterized protein; Belongs to the 5'-nucleotidase family.	0.592
A1O5_01521	A1O5_08162	W9XBV4	W9WTP0	IU_nuc_hydro domain-containing protein.	A_deaminase domain-containing protein.	0.597
A1O5_01652	A1O5_00198	W9XDC3	W9XFH0	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.	Uncharacterized protein.	0.528
A1O5_01652	A1O5_06425	W9XDC3	W9WQA8	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.	Uncharacterized protein.	0.535
A1O5_02382	A1O5_00729	W9X1L6	W9XGZ8	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	RED_N domain-containing protein.	0.771
A1O5_02382	A1O5_01521	W9X1L6	W9XBV4	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	IU_nuc_hydro domain-containing protein.	0.725
A1O5_02382	A1O5_03989	W9X1L6	W9X7G8	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Deoxyribose-phosphate aldolase.	0.928
A1O5_02382	A1O5_04190	W9X1L6	W9X7Z1	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Uncharacterized protein.	0.791
A1O5_02382	A1O5_04224	W9X1L6	W9X6W6	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	IU_nuc_hydro domain-containing protein.	0.791