(60 nodes) Nuclear pore, and Postmitotic nuclear pore complex (NPC) reformation network (Cladophialophora yegresii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O7_09848	Uncharacterized protein. (170 aa)
	A1O7_09999	Uncharacterized protein. (388 aa)
	A1O7_08153	Uncharacterized protein. (325 aa)
	A1O7_08394	Uncharacterized protein. (257 aa)
	A1O7_08663	Uncharacterized protein. (954 aa)
	A1O7_07082	Uncharacterized protein. (1767 aa)
	A1O7_09695	Uncharacterized protein. (271 aa)
	A1O7_09816	Uncharacterized protein. (665 aa)
	A1O7_10007	Exportin-1. (1072 aa)
	A1O7_05547	RanBD1 domain-containing protein. (561 aa)
	A1O7_05772	Uncharacterized protein. (1340 aa)
	A1O7_05923	Brr6_like_C_C domain-containing protein. (444 aa)
	A1O7_06192	Uncharacterized protein. (1123 aa)
	A1O7_08991	Uncharacterized protein. (1678 aa)
	A1O7_06137	Uncharacterized protein. (713 aa)
	A1O7_06343	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1013 aa)
	A1O7_08605	Uncharacterized protein. (833 aa)
	A1O7_09002	Uncharacterized protein. (559 aa)
	A1O7_03764	Nsp1_C domain-containing protein. (690 aa)
	A1O7_04049	Uncharacterized protein. (1280 aa)
	A1O7_07414	Uncharacterized protein. (796 aa)
	A1O7_07005	TAP-C domain-containing protein. (442 aa)
	A1O7_04489	ELYS domain-containing protein. (309 aa)
	A1O7_05328	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (467 aa)
	A1O7_01950	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (187 aa)
	A1O7_06149	Uncharacterized protein. (575 aa)
	A1O7_06366	Uncharacterized protein. (551 aa)
	A1O7_06471	Uncharacterized protein. (787 aa)
	A1O7_06541	Uncharacterized protein. (82 aa)
	A1O7_02546	RanBD1 domain-containing protein. (1417 aa)
	A1O7_06688	WD_REPEATS_REGION domain-containing protein. (1273 aa)
	A1O7_03243	Protein transporter sec13; Belongs to the WD repeat SEC13 family. (302 aa)
	A1O7_04221	Xpo1 domain-containing protein. (1264 aa)
	A1O7_04918	Uncharacterized protein. (944 aa)
	A1O7_00307	TPR_MLP1_2 domain-containing protein. (2036 aa)
	A1O7_05018	WD_REPEATS_REGION domain-containing protein. (406 aa)
	A1O7_09804	ATP-dependent RNA helicase DBP5; Belongs to the DEAD box helicase family. (508 aa)
	A1O7_04764	Nup54 domain-containing protein. (434 aa)
	A1O7_05288	Nup188_C domain-containing protein. (1829 aa)
	A1O7_05094	Uncharacterized protein. (196 aa)
	A1O7_01105	Peptidase S59 domain-containing protein. (1909 aa)
	A1O7_02200	Uncharacterized protein. (1011 aa)
	A1O7_01216	WW domain-containing protein. (1191 aa)
	A1O7_01447	Uncharacterized protein. (323 aa)
	A1O7_01994	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (1052 aa)
	A1O7_08613	RanBD1 domain-containing protein. (272 aa)
	A1O7_08749	Zn(2)-C6 fungal-type domain-containing protein. (684 aa)
	A1O7_02362	Uncharacterized protein. (730 aa)
	A1O7_02408	WD_REPEATS_REGION domain-containing protein. (360 aa)
	A1O7_03291	Uncharacterized protein. (254 aa)
	A1O7_06752	Uncharacterized protein. (423 aa)
	A1O7_05437	Uncharacterized protein. (1357 aa)
	A1O7_06066	Uncharacterized protein. (560 aa)
	A1O7_01104	Uncharacterized protein. (73 aa)
	A1O7_01791	Uncharacterized protein. (530 aa)
	A1O7_04224	Uncharacterized protein. (669 aa)
	A1O7_05042	DUF1996 domain-containing protein. (473 aa)
	A1O7_02153	Uncharacterized protein. (272 aa)
	A1O7_02249	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
	A1O7_00840	NUP214 domain-containing protein. (1525 aa)

Your Current Organism:

Cladophialophora yegresii

NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O7_00307	A1O7_00840	W9W791	W9X1Y4	TPR_MLP1_2 domain-containing protein.	NUP214 domain-containing protein.	0.883
A1O7_00307	A1O7_01105	W9W791	W9W9H8	TPR_MLP1_2 domain-containing protein.	Peptidase S59 domain-containing protein.	0.997
A1O7_00307	A1O7_01950	W9W791	W9W0A5	TPR_MLP1_2 domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.608
A1O7_00307	A1O7_02200	W9W791	W9W9T6	TPR_MLP1_2 domain-containing protein.	Uncharacterized protein.	0.768
A1O7_00307	A1O7_02249	W9W791	W9WU31	TPR_MLP1_2 domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.701
A1O7_00307	A1O7_02408	W9W791	W9WBM9	TPR_MLP1_2 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.991
A1O7_00307	A1O7_02546	W9W791	W9W2D7	TPR_MLP1_2 domain-containing protein.	RanBD1 domain-containing protein.	0.998
A1O7_00307	A1O7_03243	W9W791	W9W499	TPR_MLP1_2 domain-containing protein.	Protein transporter sec13; Belongs to the WD repeat SEC13 family.	0.832
A1O7_00307	A1O7_03764	W9W791	W9VVF8	TPR_MLP1_2 domain-containing protein.	Nsp1_C domain-containing protein.	0.818
A1O7_00307	A1O7_04049	W9W791	W9VVT2	TPR_MLP1_2 domain-containing protein.	Uncharacterized protein.	0.503
A1O7_00307	A1O7_04224	W9W791	W9WNT5	TPR_MLP1_2 domain-containing protein.	Uncharacterized protein.	0.918
A1O7_00307	A1O7_04764	W9W791	W9W7V3	TPR_MLP1_2 domain-containing protein.	Nup54 domain-containing protein.	0.853
A1O7_00307	A1O7_04918	W9W791	W9W6Y7	TPR_MLP1_2 domain-containing protein.	Uncharacterized protein.	0.436
A1O7_00307	A1O7_05288	W9W791	W9W816	TPR_MLP1_2 domain-containing protein.	Nup188_C domain-containing protein.	0.801
A1O7_00307	A1O7_05328	W9W791	W9VYX7	TPR_MLP1_2 domain-containing protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.838
A1O7_00307	A1O7_05437	W9W791	W9WHN5	TPR_MLP1_2 domain-containing protein.	Uncharacterized protein.	0.958
A1O7_00307	A1O7_05547	W9W791	W9VRE1	TPR_MLP1_2 domain-containing protein.	RanBD1 domain-containing protein.	0.723
A1O7_00307	A1O7_05772	W9W791	W9VRN6	TPR_MLP1_2 domain-containing protein.	Uncharacterized protein.	0.886
A1O7_00307	A1O7_06066	W9W791	W9WJG8	TPR_MLP1_2 domain-containing protein.	Uncharacterized protein.	0.792
A1O7_00307	A1O7_06137	W9W791	W9VT10	TPR_MLP1_2 domain-containing protein.	Uncharacterized protein.	0.767