(28 nodes) Mixed, incl. TP53 Regulates Transcription of Cell Cycle Genes, and Threonine catabolism network (Cladophialophora yegresii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O7_08436	Uncharacterized protein. (585 aa)
	A1O7_08878	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (237 aa)
	A1O7_09272	Uncharacterized protein. (763 aa)
	A1O7_09352	Ion_trans domain-containing protein. (624 aa)
	A1O7_07296	Uncharacterized protein. (2127 aa)
	A1O7_08388	Fungal_trans domain-containing protein. (545 aa)
	A1O7_03889	Endoribonuclease L-PSP. (126 aa)
	A1O7_04170	Uncharacterized protein. (94 aa)
	A1O7_04106	Uncharacterized protein. (632 aa)
	A1O7_07395	Endo/exonuclease/phosphatase domain-containing protein. (747 aa)
	A1O7_05313	NOT2_3_5 domain-containing protein. (415 aa)
	A1O7_06230	Uncharacterized protein. (400 aa)
	A1O7_06703	AB hydrolase-1 domain-containing protein. (607 aa)
	A1O7_03360	Uncharacterized protein. (484 aa)
	A1O7_09271	Uncharacterized protein. (872 aa)
	A1O7_09829	Uncharacterized protein. (134 aa)
	A1O7_01165	RING-type domain-containing protein. (832 aa)
	A1O7_05518	CUE domain-containing protein. (207 aa)
	A1O7_00952	Protein kinase domain-containing protein. (504 aa)
	A1O7_01043	GYF domain-containing protein. (1512 aa)
	A1O7_05804	N-acetyltransferase domain-containing protein. (199 aa)
	A1O7_00928	Endoribonuclease L-PSP. (126 aa)
	A1O7_01164	SWIB domain-containing protein. (273 aa)
	A1O7_01641	Fungal_trans domain-containing protein. (551 aa)
	A1O7_04687	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (342 aa)
	MED19	Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (363 aa)
	A1O7_00354	Uncharacterized protein. (169 aa)
	A1O7_01640	Uncharacterized protein. (518 aa)

Your Current Organism:

Cladophialophora yegresii

NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O7_00354	A1O7_04687	W9X0J8	W9WQ74	Uncharacterized protein.	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	0.452
A1O7_00928	A1O7_04106	W9WIY6	W9VWB8	Endoribonuclease L-PSP.	Uncharacterized protein.	0.405
A1O7_00928	A1O7_06230	W9WIY6	W9W1D9	Endoribonuclease L-PSP.	Uncharacterized protein.	0.463
A1O7_00928	A1O7_07296	W9WIY6	W9VMN6	Endoribonuclease L-PSP.	Uncharacterized protein.	0.454
A1O7_00928	A1O7_09271	W9WIY6	W9W5U2	Endoribonuclease L-PSP.	Uncharacterized protein.	0.405
A1O7_00928	A1O7_09272	W9WIY6	W9VLS2	Endoribonuclease L-PSP.	Uncharacterized protein.	0.405
A1O7_00952	A1O7_04687	W9WI06	W9WQ74	Protein kinase domain-containing protein.	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	0.493
A1O7_00952	A1O7_08878	W9WI06	W9VJU1	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.455
A1O7_01043	A1O7_01165	W9WI90	W9W9R1	GYF domain-containing protein.	RING-type domain-containing protein.	0.674
A1O7_01043	A1O7_03360	W9WI90	W9W4C0	GYF domain-containing protein.	Uncharacterized protein.	0.472
A1O7_01043	A1O7_04687	W9WI90	W9WQ74	GYF domain-containing protein.	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	0.899
A1O7_01043	A1O7_07296	W9WI90	W9VMN6	GYF domain-containing protein.	Uncharacterized protein.	0.488
A1O7_01043	A1O7_08878	W9WI90	W9VJU1	GYF domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.643
A1O7_01164	A1O7_01165	W9WJN4	W9W9R1	SWIB domain-containing protein.	RING-type domain-containing protein.	0.871
A1O7_01165	A1O7_01043	W9W9R1	W9WI90	RING-type domain-containing protein.	GYF domain-containing protein.	0.674
A1O7_01165	A1O7_01164	W9W9R1	W9WJN4	RING-type domain-containing protein.	SWIB domain-containing protein.	0.871
A1O7_01165	A1O7_04687	W9W9R1	W9WQ74	RING-type domain-containing protein.	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	0.615
A1O7_01165	A1O7_06703	W9W9R1	W9W406	RING-type domain-containing protein.	AB hydrolase-1 domain-containing protein.	0.492
A1O7_01165	A1O7_08878	W9W9R1	W9VJU1	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.484
A1O7_01165	A1O7_09352	W9W9R1	W9VLZ5	RING-type domain-containing protein.	Ion_trans domain-containing protein.	0.492