(11 nodes) Transcription export complex, and RNA Polymerase II Transcription Termination network (Cladophialophora yegresii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O7_06841	Uncharacterized protein. (320 aa)
	A1O7_06981	Uncharacterized protein. (448 aa)
	A1O7_08786	Uncharacterized protein. (87 aa)
	A1O7_06359	WD_REPEATS_REGION domain-containing protein. (347 aa)
	A1O7_04885	ABM domain-containing protein. (107 aa)
	A1O7_07784	Uncharacterized protein. (606 aa)
	A1O7_01633	Uncharacterized protein. (211 aa)
	A1O7_02974	Uncharacterized protein. (285 aa)
	A1O7_00511	SAP domain-containing protein. (269 aa)
	A1O7_01901	Uncharacterized protein. (716 aa)
	A1O7_03735	Zn(2)-C6 fungal-type domain-containing protein. (722 aa)

Your Current Organism:

Cladophialophora yegresii

NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O7_00511	A1O7_01633	W9WGQ2	W9WB08	SAP domain-containing protein.	Uncharacterized protein.	0.781
A1O7_00511	A1O7_01901	W9WGQ2	W9WKP0	SAP domain-containing protein.	Uncharacterized protein.	0.850
A1O7_00511	A1O7_02974	W9WGQ2	W9WD94	SAP domain-containing protein.	Uncharacterized protein.	0.739
A1O7_00511	A1O7_03735	W9WGQ2	W9WMC1	SAP domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.739
A1O7_00511	A1O7_06359	W9WGQ2	W9VTQ1	SAP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.737
A1O7_00511	A1O7_06841	W9WGQ2	W9VLC5	SAP domain-containing protein.	Uncharacterized protein.	0.803
A1O7_00511	A1O7_06981	W9WGQ2	W9VLP9	SAP domain-containing protein.	Uncharacterized protein.	0.803
A1O7_00511	A1O7_07784	W9WGQ2	W9VYV6	SAP domain-containing protein.	Uncharacterized protein.	0.928
A1O7_00511	A1O7_08786	W9WGQ2	W9VSA1	SAP domain-containing protein.	Uncharacterized protein.	0.803
A1O7_01633	A1O7_00511	W9WB08	W9WGQ2	Uncharacterized protein.	SAP domain-containing protein.	0.781
A1O7_01633	A1O7_01901	W9WB08	W9WKP0	Uncharacterized protein.	Uncharacterized protein.	0.999
A1O7_01633	A1O7_02974	W9WB08	W9WD94	Uncharacterized protein.	Uncharacterized protein.	0.918
A1O7_01633	A1O7_03735	W9WB08	W9WMC1	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.918
A1O7_01633	A1O7_04885	W9WB08	W9VY17	Uncharacterized protein.	ABM domain-containing protein.	0.781
A1O7_01633	A1O7_06359	W9WB08	W9VTQ1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A1O7_01633	A1O7_06841	W9WB08	W9VLC5	Uncharacterized protein.	Uncharacterized protein.	0.999
A1O7_01633	A1O7_06981	W9WB08	W9VLP9	Uncharacterized protein.	Uncharacterized protein.	0.822
A1O7_01633	A1O7_07784	W9WB08	W9VYV6	Uncharacterized protein.	Uncharacterized protein.	0.931
A1O7_01633	A1O7_08786	W9WB08	W9VSA1	Uncharacterized protein.	Uncharacterized protein.	0.906
A1O7_01901	A1O7_00511	W9WKP0	W9WGQ2	Uncharacterized protein.	SAP domain-containing protein.	0.850