25 items (Cladophialophora yegresii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O7_04230	Uncharacterized protein. (1404 aa)
	A1O7_04143	Uncharacterized protein. (254 aa)
	A1O7_03105	EST1_DNA_bind domain-containing protein. (588 aa)
	A1O7_02919	RNase_PH domain-containing protein. (353 aa)
	A1O7_03259	RRM_2 domain-containing protein. (424 aa)
	A1O7_05679	ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (536 aa)
	A1O7_03119	DUF2439 domain-containing protein. (759 aa)
	A1O7_05977	WD_REPEATS_REGION domain-containing protein. (321 aa)
	A1O7_04601	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1411 aa)
	A1O7_08892	Uncharacterized protein. (481 aa)
	A1O7_10162	Uncharacterized protein. (1197 aa)
	A1O7_09513	RNase_PH domain-containing protein. (410 aa)
	A1O7_07287	NTP_transf_9 domain-containing protein. (163 aa)
	A1O7_09372	Uncharacterized protein. (1259 aa)
	A1O7_09697	RNase_PH domain-containing protein. (278 aa)
	A1O7_09455	Mago-bind domain-containing protein. (221 aa)
	A1O7_09219	Uncharacterized protein. (291 aa)
	A1O7_03317	Uncharacterized protein. (339 aa)
	A1O7_03260	Uncharacterized protein. (118 aa)
	A1O7_03148	Uncharacterized protein. (848 aa)
	A1O7_08704	Nudix hydrolase domain-containing protein. (889 aa)
	A1O7_01337	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (226 aa)
	A1O7_01327	Uncharacterized protein. (420 aa)
	A1O7_01944	RNase_PH domain-containing protein. (258 aa)
	A1O7_05278	Regulator-nonsense transcripts 1. (1080 aa)

Your Current Organism:

Cladophialophora yegresii

NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O7_01337	A1O7_03148	W9WAN8	W9WCJ0	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.874
A1O7_01337	A1O7_04601	W9WAN8	W9VXQ9	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.682
A1O7_01337	A1O7_05278	W9WAN8	W9W806	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Regulator-nonsense transcripts 1.	0.570
A1O7_01337	A1O7_05679	W9WAN8	W9WIC2	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family.	0.599
A1O7_01337	A1O7_08704	W9WAN8	W9WB47	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Nudix hydrolase domain-containing protein.	0.465
A1O7_01337	A1O7_08892	W9WAN8	W9VUX9	Translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.773
A1O7_01944	A1O7_02919	W9WAF7	W9W336	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
A1O7_01944	A1O7_03317	W9WAF7	W9WD09	RNase_PH domain-containing protein.	Uncharacterized protein.	0.718
A1O7_01944	A1O7_04143	W9WAF7	W9W4S7	RNase_PH domain-containing protein.	Uncharacterized protein.	0.614
A1O7_01944	A1O7_04230	W9WAF7	W9W506	RNase_PH domain-containing protein.	Uncharacterized protein.	0.852
A1O7_01944	A1O7_04601	W9WAF7	W9VXQ9	RNase_PH domain-containing protein.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.838
A1O7_01944	A1O7_05977	W9WAF7	W9W0Q4	RNase_PH domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.812
A1O7_01944	A1O7_07287	W9WAF7	W9VN39	RNase_PH domain-containing protein.	NTP_transf_9 domain-containing protein.	0.614
A1O7_01944	A1O7_08704	W9WAF7	W9WB47	RNase_PH domain-containing protein.	Nudix hydrolase domain-containing protein.	0.651
A1O7_01944	A1O7_09219	W9WAF7	W9VEJ6	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
A1O7_01944	A1O7_09372	W9WAF7	W9VM14	RNase_PH domain-containing protein.	Uncharacterized protein.	0.926
A1O7_01944	A1O7_09513	W9WAF7	W9VPV8	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.998
A1O7_01944	A1O7_09697	W9WAF7	W9VFX3	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
A1O7_02919	A1O7_01944	W9W336	W9WAF7	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
A1O7_02919	A1O7_04230	W9W336	W9W506	RNase_PH domain-containing protein.	Uncharacterized protein.	0.763