51 items (Cladophialophora yegresii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O7_03867	HRDC domain-containing protein. (824 aa)
	A1O7_09219	Uncharacterized protein. (291 aa)
	A1O7_09370	Ribosome biogenesis protein n. (261 aa)
	A1O7_09530	WD_REPEATS_REGION domain-containing protein. (557 aa)
	A1O7_09697	RNase_PH domain-containing protein. (278 aa)
	A1O7_08451	Uncharacterized protein. (215 aa)
	A1O7_08853	Uncharacterized protein. (269 aa)
	A1O7_07417	Exonuclease domain-containing protein. (700 aa)
	A1O7_07675	Nop domain-containing protein. (667 aa)
	A1O7_09413	Uncharacterized protein. (942 aa)
	A1O7_09513	RNase_PH domain-containing protein. (410 aa)
	A1O7_08282	Uncharacterized protein. (186 aa)
	A1O7_05381	18S rRNA biogenesis protein RCL1. (407 aa)
	A1O7_05747	WD_REPEATS_REGION domain-containing protein. (963 aa)
	A1O7_09036	Uncharacterized protein. (211 aa)
	A1O7_06399	Uncharacterized protein. (231 aa)
	A1O7_08651	Uncharacterized protein. (1249 aa)
	A1O7_08802	Uncharacterized protein. (1812 aa)
	A1O7_08852	Uncharacterized protein. (352 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (838 aa)
	A1O7_04429	Exosome complex component RRP4. (350 aa)
	A1O7_04620	WD_REPEATS_REGION domain-containing protein. (888 aa)
	A1O7_04906	Uncharacterized protein. (277 aa)
	A1O7_05220	Brix domain-containing protein. (337 aa)
	A1O7_05393	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (339 aa)
	A1O7_05221	Uncharacterized protein. (347 aa)
	A1O7_05616	Uncharacterized protein. (523 aa)
	A1O7_06058	Kri1_C domain-containing protein. (609 aa)
	A1O7_02675	Uncharacterized protein. (757 aa)
	A1O7_06140	Uncharacterized protein. (1069 aa)
	A1O7_02919	RNase_PH domain-containing protein. (353 aa)
	A1O7_02926	RAI1 domain-containing protein. (392 aa)
	A1O7_03258	Uncharacterized protein. (343 aa)
	A1O7_09688	CBF domain-containing protein. (287 aa)
	A1O7_01944	RNase_PH domain-containing protein. (258 aa)
	A1O7_01664	Uncharacterized protein. (275 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (675 aa)
	A1O7_01694	WD_REPEATS_REGION domain-containing protein. (593 aa)
	A1O7_02479	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (88 aa)
	A1O7_03265	Fcf2 domain-containing protein. (225 aa)
	A1O7_02795	Uncharacterized protein. (1100 aa)
	A1O7_03585	Brix domain-containing protein. (439 aa)
	A1O7_03195	Protein MAK16; Belongs to the MAK16 family. (325 aa)
	A1O7_01455	rRNA-processing protein FCF1. (185 aa)
	A1O7_01139	Uncharacterized protein; Belongs to the RNR ribonuclease family. (1006 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (463 aa)
	A1O7_01836	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (256 aa)
	A1O7_01871	Pre-rRNA-processing protein PNO1. (264 aa)
	A1O7_06530	KH_dom_type_1 domain-containing protein. (245 aa)
	A1O7_00034	Uncharacterized protein. (274 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (780 aa)

Your Current Organism:

Cladophialophora yegresii

NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O7_00034	A1O7_01139	W9WZM6	W9WJL0	Uncharacterized protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.990
A1O7_00034	A1O7_01455	W9WZM6	W9WJG4	Uncharacterized protein.	rRNA-processing protein FCF1.	0.908
A1O7_00034	A1O7_01694	W9WZM6	W9WBQ6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.886
A1O7_00034	A1O7_01836	W9WZM6	W9WKH4	Uncharacterized protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.735
A1O7_00034	A1O7_01871	W9WZM6	W9WKL1	Uncharacterized protein.	Pre-rRNA-processing protein PNO1.	0.643
A1O7_00034	A1O7_01944	W9WZM6	W9WAF7	Uncharacterized protein.	RNase_PH domain-containing protein.	0.983
A1O7_00034	A1O7_02919	W9WZM6	W9W336	Uncharacterized protein.	RNase_PH domain-containing protein.	0.996
A1O7_00034	A1O7_03195	W9WZM6	W9WDX3	Uncharacterized protein.	Protein MAK16; Belongs to the MAK16 family.	0.452
A1O7_00034	A1O7_03265	W9WZM6	W9WCT6	Uncharacterized protein.	Fcf2 domain-containing protein.	0.695
A1O7_00034	A1O7_03867	W9WZM6	W9W5A7	Uncharacterized protein.	HRDC domain-containing protein.	0.668
A1O7_00034	A1O7_04429	W9WZM6	W9VWR4	Uncharacterized protein.	Exosome complex component RRP4.	0.996
A1O7_00034	A1O7_04620	W9WZM6	W9VXA7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.880
A1O7_00034	A1O7_04906	W9WZM6	W9VYI6	Uncharacterized protein.	Uncharacterized protein.	0.535
A1O7_00034	A1O7_05381	W9WZM6	W9VQY4	Uncharacterized protein.	18S rRNA biogenesis protein RCL1.	0.886
A1O7_00034	A1O7_05393	W9WZM6	W9VZ38	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.819
A1O7_00034	A1O7_05616	W9WZM6	W9W102	Uncharacterized protein.	Uncharacterized protein.	0.737
A1O7_00034	A1O7_05747	W9WZM6	W9VRH8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.886
A1O7_00034	A1O7_06140	W9WZM6	W9W2G9	Uncharacterized protein.	Uncharacterized protein.	0.985
A1O7_00034	A1O7_06530	W9WZM6	W9WKW0	Uncharacterized protein.	KH_dom_type_1 domain-containing protein.	0.989
A1O7_00034	A1O7_07417	W9WZM6	W9VNG6	Uncharacterized protein.	Exonuclease domain-containing protein.	0.488