STRINGSTRING
A1O7_01691 A1O7_01691 PAN2 PAN2 A1O7_09299 A1O7_09299 A1O7_09304 A1O7_09304 A1O7_09224 A1O7_09224 A1O7_09310 A1O7_09310 A1O7_09335 A1O7_09335 A1O7_09913 A1O7_09913 A1O7_09818 A1O7_09818 LSM4 LSM4 A1O7_09883 A1O7_09883 A1O7_09909 A1O7_09909 A1O7_10088 A1O7_10088 A1O7_10029 A1O7_10029 LSM1 LSM1 A1O7_08007 A1O7_08007 A1O7_08087 A1O7_08087 CLP1 CLP1 A1O7_08309 A1O7_08309 A1O7_08460 A1O7_08460 A1O7_08285 A1O7_08285 A1O7_08400 A1O7_08400 A1O7_08642 A1O7_08642 A1O7_08713 A1O7_08713 A1O7_08723 A1O7_08723 A1O7_08809 A1O7_08809 A1O7_09033 A1O7_09033 A1O7_06841 A1O7_06841 A1O7_09251 A1O7_09251 A1O7_07106 A1O7_07106 A1O7_06992 A1O7_06992 A1O7_07166 A1O7_07166 A1O7_07261 A1O7_07261 A1O7_07167 A1O7_07167 A1O7_07584 A1O7_07584 A1O7_07689 A1O7_07689 A1O7_10136 A1O7_10136 A1O7_09217 A1O7_09217 A1O7_07880 A1O7_07880 A1O7_07745 A1O7_07745 A1O7_07831 A1O7_07831 A1O7_09604 A1O7_09604 A1O7_08080 A1O7_08080 A1O7_08100 A1O7_08100 A1O7_09786 A1O7_09786 A1O7_09821 A1O7_09821 A1O7_08282 A1O7_08282 A1O7_09876 A1O7_09876 A1O7_05376 A1O7_05376 A1O7_05637 A1O7_05637 A1O7_05471 A1O7_05471 A1O7_05647 A1O7_05647 A1O7_08448 A1O7_08448 A1O7_10062 A1O7_10062 A1O7_10112 A1O7_10112 A1O7_08690 A1O7_08690 A1O7_05733 A1O7_05733 LSM8 LSM8 A1O7_05863 A1O7_05863 A1O7_08152 A1O7_08152 A1O7_06045 A1O7_06045 A1O7_09011 A1O7_09011 A1O7_08172 A1O7_08172 A1O7_08182 A1O7_08182 A1O7_06203 A1O7_06203 A1O7_06408 A1O7_06408 A1O7_08333 A1O7_08333 A1O7_06258 A1O7_06258 A1O7_06318 A1O7_06318 A1O7_06424 A1O7_06424 A1O7_06824 A1O7_06824 A1O7_06679 A1O7_06679 A1O7_08656 A1O7_08656 A1O7_08731 A1O7_08731 A1O7_08812 A1O7_08812 A1O7_08857 A1O7_08857 A1O7_08902 A1O7_08902 A1O7_03824 A1O7_03824 A1O7_07264 A1O7_07264 A1O7_04202 A1O7_04202 A1O7_07444 A1O7_07444 A1O7_04409 A1O7_04409 A1O7_07506 A1O7_07506 A1O7_07537 A1O7_07537 A1O7_07552 A1O7_07552 A1O7_07120 A1O7_07120 A1O7_04670 A1O7_04670 A1O7_07250 A1O7_07250 A1O7_04535 A1O7_04535 A1O7_07325 A1O7_07325 A1O7_04880 A1O7_04880 A1O7_07974 A1O7_07974 A1O7_04826 A1O7_04826 A1O7_07583 A1O7_07583 A1O7_07784 A1O7_07784 A1O7_05205 A1O7_05205 A1O7_05051 A1O7_05051 A1O7_05261 A1O7_05261 A1O7_05865 A1O7_05865 A1O7_02001 A1O7_02001 A1O7_02006 A1O7_02006 A1O7_02092 A1O7_02092 A1O7_02227 A1O7_02227 A1O7_05736 A1O7_05736 A1O7_06350 A1O7_06350 A1O7_05871 A1O7_05871 PAN3 PAN3 A1O7_06406 A1O7_06406 A1O7_05927 A1O7_05927 A1O7_06486 A1O7_06486 A1O7_02471 A1O7_02471 A1O7_02746 A1O7_02746 A1O7_02919 A1O7_02919 A1O7_02822 A1O7_02822 A1O7_02926 A1O7_02926 A1O7_03701 A1O7_03701 A1O7_03731 A1O7_03731 A1O7_03006 A1O7_03006 A1O7_03216 A1O7_03216 A1O7_06713 A1O7_06713 A1O7_03942 A1O7_03942 A1O7_04052 A1O7_04052 A1O7_03472 A1O7_03472 A1O7_03623 A1O7_03623 A1O7_03659 A1O7_03659 A1O7_04312 A1O7_04312 A1O7_04342 A1O7_04342 A1O7_03958 A1O7_03958 A1O7_04437 A1O7_04437 A1O7_03973 A1O7_03973 A1O7_04018 A1O7_04018 A1O7_04507 A1O7_04507 A1O7_04603 A1O7_04603 A1O7_09536 A1O7_09536 A1O7_00207 A1O7_00207 A1O7_00242 A1O7_00242 A1O7_09809 A1O7_09809 A1O7_09834 A1O7_09834 A1O7_09849 A1O7_09849 A1O7_05123 A1O7_05123 A1O7_04664 A1O7_04664 A1O7_00478 A1O7_00478 A1O7_04734 A1O7_04734 A1O7_00543 A1O7_00543 A1O7_04834 A1O7_04834 A1O7_00489 A1O7_00489 A1O7_00544 A1O7_00544 A1O7_00828 A1O7_00828 A1O7_00944 A1O7_00944 A1O7_01001 A1O7_01001 A1O7_01056 A1O7_01056 A1O7_01061 A1O7_01061 A1O7_01096 A1O7_01096 A1O7_08291 A1O7_08291 A1O7_08331 A1O7_08331 A1O7_08361 A1O7_08361 LSM5 LSM5 A1O7_01964 A1O7_01964 A1O7_01472 A1O7_01472 A1O7_01487 A1O7_01487 A1O7_01502 A1O7_01502 A1O7_02528 A1O7_02528 A1O7_02578 A1O7_02578 A1O7_01613 A1O7_01613 LSM3 LSM3 A1O7_08780 A1O7_08780 A1O7_01729 A1O7_01729 A1O7_01744 A1O7_01744 A1O7_08950 A1O7_08950 A1O7_02928 A1O7_02928 A1O7_02524 A1O7_02524 A1O7_03003 A1O7_03003 A1O7_03088 A1O7_03088 A1O7_03108 A1O7_03108 A1O7_03133 A1O7_03133 A1O7_03148 A1O7_03148 A1O7_02740 A1O7_02740 A1O7_03275 A1O7_03275 A1O7_03317 A1O7_03317 A1O7_03327 A1O7_03327 A1O7_06762 A1O7_06762 A1O7_02939 A1O7_02939 A1O7_02974 A1O7_02974 A1O7_03149 A1O7_03149 A1O7_07093 A1O7_07093 A1O7_03415 A1O7_03415 A1O7_07353 A1O7_07353 A1O7_03668 A1O7_03668 A1O7_07671 A1O7_07671 A1O7_07882 A1O7_07882 A1O7_00721 A1O7_00721 A1O7_00376 A1O7_00376 A1O7_00442 A1O7_00442 A1O7_00502 A1O7_00502 A1O7_05498 A1O7_05498 A1O7_05553 A1O7_05553 A1O7_05659 A1O7_05659 A1O7_00978 A1O7_00978 A1O7_01139 A1O7_01139 A1O7_06113 A1O7_06113 A1O7_01159 A1O7_01159 A1O7_01551 A1O7_01551 A1O7_01586 A1O7_01586 A1O7_01552 A1O7_01552 A1O7_06681 A1O7_06681 A1O7_06696 A1O7_06696 A1O7_01747 A1O7_01747 A1O7_01902 A1O7_01902 A1O7_01922 A1O7_01922 A1O7_03735 A1O7_03735 A1O7_03981 A1O7_03981 A1O7_04102 A1O7_04102 A1O7_04987 A1O7_04987 A1O7_02068 A1O7_02068 A1O7_02259 A1O7_02259 A1O7_02497 A1O7_02497 A1O7_02652 A1O7_02652 A1O7_02813 A1O7_02813 A1O7_02997 A1O7_02997 A1O7_03027 A1O7_03027 A1O7_03037 A1O7_03037 A1O7_03274 A1O7_03274 A1O7_03372 A1O7_03372 A1O7_03579 A1O7_03579 A1O7_03584 A1O7_03584 A1O7_00204 A1O7_00204 A1O7_01419 A1O7_01419 A1O7_01570 A1O7_01570
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O7_01691G-patch_2 domain-containing protein. (463 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1183 aa)
A1O7_09299Uncharacterized protein. (303 aa)
A1O7_09304Uncharacterized protein; Belongs to the DEAD box helicase family. (546 aa)
A1O7_09224mRNA (Guanine-N7-)-methyltransferase. (658 aa)
A1O7_09310mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (397 aa)
A1O7_09335Uncharacterized protein. (562 aa)
A1O7_09913Sde2_N_Ubi domain-containing protein. (335 aa)
A1O7_09818Uncharacterized protein. (447 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (145 aa)
A1O7_09883Uncharacterized protein. (353 aa)
A1O7_09909Uncharacterized protein. (674 aa)
A1O7_10088Matrin-type domain-containing protein. (518 aa)
A1O7_10029Uncharacterized protein; Belongs to the cyclin family. (546 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (205 aa)
A1O7_08007RRM domain-containing protein. (190 aa)
A1O7_08087Pre-mRNA-splicing factor isy1. (255 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (501 aa)
A1O7_08309U2 small nuclear ribonucleoprotein A. (248 aa)
A1O7_08460Pre-mRNA-splicing factor cef1. (780 aa)
A1O7_08285DBR1 domain-containing protein. (826 aa)
A1O7_08400Methyltransf_25 domain-containing protein. (280 aa)
A1O7_08642Pre-mRNA-splicing factor prp46. (438 aa)
A1O7_08713WD_REPEATS_REGION domain-containing protein. (354 aa)
A1O7_08723Small nuclear ribonucleoprotein Sm D2. (75 aa)
A1O7_08809Pre-mRNA-splicing factor syf1. (852 aa)
A1O7_09033U1 small nuclear ribonucleoprotein 70kDa. (406 aa)
A1O7_06841Uncharacterized protein. (320 aa)
A1O7_09251RRM domain-containing protein. (116 aa)
A1O7_07106U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A1O7_06992Uncharacterized protein. (249 aa)
A1O7_07166DUF3453 domain-containing protein. (768 aa)
A1O7_07261CID domain-containing protein. (869 aa)
A1O7_07167Serine/threonine-protein kinase PRP4. (511 aa)
A1O7_07584Uncharacterized protein. (198 aa)
A1O7_07689Uncharacterized protein. (305 aa)
A1O7_10136Uncharacterized protein. (823 aa)
A1O7_09217Uncharacterized protein. (222 aa)
A1O7_07880Uncharacterized protein; Belongs to the DEAD box helicase family. (688 aa)
A1O7_077455'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1055 aa)
A1O7_07831Uncharacterized protein. (584 aa)
A1O7_09604Slu7 domain-containing protein. (519 aa)
A1O7_08080Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A1O7_08100NmrA domain-containing protein. (308 aa)
A1O7_09786Branchpoint-bridging protein. (580 aa)
A1O7_09821Uncharacterized protein. (667 aa)
A1O7_08282Uncharacterized protein. (186 aa)
A1O7_09876DUF2040 domain-containing protein. (409 aa)
A1O7_05376Uncharacterized protein. (2233 aa)
A1O7_05637Uncharacterized protein. (406 aa)
A1O7_05471C2H2-type domain-containing protein. (166 aa)
A1O7_05647Uncharacterized protein. (765 aa)
A1O7_08448Uncharacterized protein. (250 aa)
A1O7_10062Isochorismatase domain-containing protein. (313 aa)
A1O7_10112Uncharacterized protein. (245 aa)
A1O7_08690J domain-containing protein. (266 aa)
A1O7_05733Pre-mRNA-splicing factor cwc22. (664 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A1O7_05863Small nuclear ribonucleoprotein G. (69 aa)
A1O7_08152Uncharacterized protein. (393 aa)
A1O7_06045Matrin-type domain-containing protein. (239 aa)
A1O7_09011Pre-mRNA-processing factor 19. (477 aa)
A1O7_08172Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (291 aa)
A1O7_08182DnaJ like subfamily C member 8. (212 aa)
A1O7_06203RRM domain-containing protein. (291 aa)
A1O7_06408G-patch domain-containing protein. (722 aa)
A1O7_08333Uncharacterized protein. (374 aa)
A1O7_06258U1-type domain-containing protein. (290 aa)
A1O7_06318Uncharacterized protein. (680 aa)
A1O7_06424Protein mago nashi. (157 aa)
A1O7_06824Adenosinetriphosphatase. (985 aa)
A1O7_06679Nop domain-containing protein. (597 aa)
A1O7_08656Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
A1O7_08731Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (774 aa)
A1O7_08812Uncharacterized protein. (254 aa)
A1O7_08857MFAP1 domain-containing protein. (516 aa)
A1O7_08902Adenosinetriphosphatase. (1232 aa)
A1O7_03824Uncharacterized protein. (299 aa)
A1O7_07264Uncharacterized protein. (680 aa)
A1O7_04202RRM domain-containing protein. (199 aa)
A1O7_07444Uncharacterized protein. (106 aa)
A1O7_04409U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (180 aa)
A1O7_07506G-patch domain-containing protein. (327 aa)
A1O7_07537Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)
A1O7_07552Adenosinetriphosphatase. (989 aa)
A1O7_07120RRM domain-containing protein. (251 aa)
A1O7_04670CMGC/CDK/CRK7 protein kinase. (710 aa)
A1O7_07250CMGC/DYRK/PRP4 protein kinase. (612 aa)
A1O7_04535Uncharacterized protein. (1288 aa)
A1O7_07325Uncharacterized protein. (380 aa)
A1O7_04880RRM domain-containing protein. (850 aa)
A1O7_07974PSP domain-containing protein. (597 aa)
A1O7_04826Uncharacterized protein. (517 aa)
A1O7_07583NAD(P)-bd_dom domain-containing protein. (113 aa)
A1O7_07784Uncharacterized protein. (606 aa)
A1O7_05205Uncharacterized protein. (137 aa)
A1O7_05051Uncharacterized protein. (307 aa)
A1O7_05261CID domain-containing protein. (666 aa)
A1O7_05865Uncharacterized protein. (445 aa)
A1O7_02001RNB domain-containing protein. (1090 aa)
A1O7_02006DUF1716 domain-containing protein. (609 aa)
A1O7_02092Uncharacterized protein. (209 aa)
A1O7_02227Endoribonuclease ysh1. (854 aa)
A1O7_05736CPSF_A domain-containing protein. (1355 aa)
A1O7_06350Uncharacterized protein. (232 aa)
A1O7_05871CDC73_C domain-containing protein. (444 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (666 aa)
A1O7_06406Cir_N domain-containing protein. (392 aa)
A1O7_05927Uncharacterized protein. (432 aa)
A1O7_06486Uncharacterized protein. (1096 aa)
A1O7_02471Small nuclear ribonucleoprotein. (133 aa)
A1O7_02746Cleavage and polyadenylation specificity factor subunit 2. (951 aa)
A1O7_02919RNase_PH domain-containing protein. (353 aa)
A1O7_02822SNRNP27 domain-containing protein. (268 aa)
A1O7_02926RAI1 domain-containing protein. (392 aa)
A1O7_03701FHA domain-containing protein. (213 aa)
A1O7_03731Uncharacterized protein. (202 aa)
A1O7_03006Uncharacterized protein. (317 aa)
A1O7_03216Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (118 aa)
A1O7_06713Uncharacterized protein. (390 aa)
A1O7_03942Uncharacterized protein. (173 aa)
A1O7_04052ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family. (513 aa)
A1O7_03472Suf domain-containing protein. (1026 aa)
A1O7_03623Cwf21 domain-containing protein. (183 aa)
A1O7_03659Uncharacterized protein. (664 aa)
A1O7_04312Uncharacterized protein. (614 aa)
A1O7_04342Uncharacterized protein. (661 aa)
A1O7_03958Pre-mRNA-splicing factor slt11. (381 aa)
A1O7_04437Splicing factor subunit; Belongs to the SF3B5 family. (85 aa)
A1O7_03973Uncharacterized protein. (285 aa)
A1O7_04018Uncharacterized protein. (806 aa)
A1O7_04507U2 snRNP component prp10. (1224 aa)
A1O7_04603WD_REPEATS_REGION domain-containing protein. (336 aa)
A1O7_09536G-patch domain-containing protein. (666 aa)
A1O7_00207U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (563 aa)
A1O7_00242Uncharacterized protein. (339 aa)
A1O7_09809Uncharacterized protein. (986 aa)
A1O7_09834Nuclear cap-binding protein subunit 2. (177 aa)
A1O7_09849Tudor domain-containing protein. (293 aa)
A1O7_05123SNW domain-containing protein 1. (605 aa)
A1O7_04664Endo-1,3(4)-beta-glucanase. (363 aa)
A1O7_00478Uncharacterized protein. (510 aa)
A1O7_04734PPIase cyclophilin-type domain-containing protein. (553 aa)
A1O7_00543Pre-mRNA-splicing factor ini1. (110 aa)
A1O7_04834Uncharacterized protein. (337 aa)
A1O7_00489CID domain-containing protein. (520 aa)
A1O7_00544Pinin_SDK_memA domain-containing protein. (357 aa)
A1O7_00828Uncharacterized protein. (331 aa)
A1O7_00944Uncharacterized protein. (384 aa)
A1O7_01001RRM domain-containing protein. (321 aa)
A1O7_01056GST N-terminal domain-containing protein. (240 aa)
A1O7_01061Uncharacterized protein. (538 aa)
A1O7_01096Uncharacterized protein. (316 aa)
A1O7_08291Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
A1O7_08331Fip1 domain-containing protein. (341 aa)
A1O7_08361Uncharacterized protein. (225 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (150 aa)
A1O7_01964Uncharacterized protein. (322 aa)
A1O7_01472CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (422 aa)
A1O7_01487WD_REPEATS_REGION domain-containing protein. (576 aa)
A1O7_01502Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1095 aa)
A1O7_02528Pre-mRNA-processing-splicing factor 8. (2363 aa)
A1O7_02578tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs. (751 aa)
A1O7_01613mRNA_triPase domain-containing protein. (781 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A1O7_08780Uncharacterized protein. (1705 aa)
A1O7_01729Small nuclear ribonucleoprotein. (95 aa)
A1O7_01744Ubiquitin thiolesterase. (577 aa)
A1O7_08950Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (765 aa)
A1O7_02928Uncharacterized protein. (437 aa)
A1O7_02524Uncharacterized protein. (547 aa)
A1O7_03003ATP-dependent RNA helicase sub2. (440 aa)
A1O7_03088Uncharacterized protein. (399 aa)
A1O7_03108Uncharacterized protein. (521 aa)
A1O7_03133Uncharacterized protein. (327 aa)
A1O7_03148Uncharacterized protein. (848 aa)
A1O7_02740Uncharacterized protein. (2203 aa)
A1O7_03275Small nuclear ribonucleoprotein F. (93 aa)
A1O7_03317Uncharacterized protein. (339 aa)
A1O7_03327RRM domain-containing protein. (359 aa)
A1O7_06762C2H2-type domain-containing protein. (937 aa)
A1O7_02939Uncharacterized protein. (338 aa)
A1O7_02974Uncharacterized protein. (285 aa)
A1O7_03149Uncharacterized protein. (335 aa)
A1O7_07093RPOL4c domain-containing protein. (152 aa)
A1O7_03415PWI domain-containing protein. (124 aa)
A1O7_07353Elongation factor 2. (982 aa)
A1O7_03668Uncharacterized protein. (252 aa)
A1O7_07671Uncharacterized protein. (220 aa)
A1O7_07882C2H2-type domain-containing protein. (220 aa)
A1O7_00721Uncharacterized protein. (601 aa)
A1O7_00376WD_REPEATS_REGION domain-containing protein. (672 aa)
A1O7_00442Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (130 aa)
A1O7_00502CID domain-containing protein. (265 aa)
A1O7_05498Uncharacterized protein. (135 aa)
A1O7_05553Uncharacterized protein. (479 aa)
A1O7_05659CMGC/SRPK protein kinase. (630 aa)
A1O7_00978WD_REPEATS_REGION domain-containing protein. (358 aa)
A1O7_01139Uncharacterized protein; Belongs to the RNR ribonuclease family. (1006 aa)
A1O7_06113Uncharacterized protein. (499 aa)
A1O7_01159Small nuclear ribonucleoprotein B and B. (212 aa)
A1O7_01551Pre-mRNA-splicing ATP-dependent RNA helicase prp28; Belongs to the DEAD box helicase family. (799 aa)
A1O7_01586RRM domain-containing protein. (195 aa)
A1O7_01552Uncharacterized protein. (561 aa)
A1O7_06681Pre-mRNA-splicing factor clf1. (677 aa)
A1O7_06696Uncharacterized protein. (764 aa)
A1O7_01747IRE protein kinase. (1192 aa)
A1O7_01902Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1419 aa)
A1O7_01922Uncharacterized protein. (562 aa)
A1O7_03735Zn(2)-C6 fungal-type domain-containing protein. (722 aa)
A1O7_03981Plus3 domain-containing protein. (625 aa)
A1O7_04102Uncharacterized protein. (638 aa)
A1O7_04987Uncharacterized protein. (689 aa)
A1O7_02068Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (614 aa)
A1O7_02259Uncharacterized protein. (379 aa)
A1O7_02497Pre-mRNA-splicing factor rse1. (1211 aa)
A1O7_02652Uncharacterized protein. (571 aa)
A1O7_02813WD_REPEATS_REGION domain-containing protein. (342 aa)
A1O7_02997Uncharacterized protein. (216 aa)
A1O7_03027Uncharacterized protein. (238 aa)
A1O7_03037KH domain-containing protein. (484 aa)
A1O7_03274Uncharacterized protein. (160 aa)
A1O7_03372Uncharacterized protein. (730 aa)
A1O7_03579CVNH domain-containing protein. (416 aa)
A1O7_03584GST N-terminal domain-containing protein. (244 aa)
A1O7_00204RRM domain-containing protein. (296 aa)
A1O7_01419CMGC/SRPK protein kinase. (575 aa)
A1O7_01570Tyrosine--tRNA ligase. (615 aa)
Your Current Organism:
Cladophialophora yegresii
NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405
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