17 items (Cladophialophora yegresii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O7_09479	Uncharacterized protein. (681 aa)
	A1O7_00942	Uncharacterized protein. (1033 aa)
	A1O7_10057	Cyclin N-terminal domain-containing protein. (437 aa)
	A1O7_07202	Uncharacterized protein; Belongs to the cyclin family. (526 aa)
	A1O7_07346	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (114 aa)
	A1O7_08559	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (670 aa)
	A1O7_09069	CYCLIN domain-containing protein; Belongs to the cyclin family. (357 aa)
	A1O7_10029	Uncharacterized protein; Belongs to the cyclin family. (546 aa)
	A1O7_05225	Phosphate system cyclin PHO80. (282 aa)
	A1O7_02827	Uncharacterized protein. (275 aa)
	A1O7_03298	Uncharacterized protein. (350 aa)
	A1O7_01398	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (411 aa)
	A1O7_02815	CYCLIN domain-containing protein; Belongs to the cyclin family. (402 aa)
	A1O7_01460	Uncharacterized protein. (443 aa)
	A1O7_06274	G2/mitotic-specific cyclin 1/2; Belongs to the cyclin family. (483 aa)
	A1O7_01786	RING-type domain-containing protein. (276 aa)
	A1O7_07095	Uncharacterized protein. (351 aa)

Your Current Organism:

Cladophialophora yegresii

NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O7_00942	A1O7_01398	W9WHZ5	W9WAU2	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.444
A1O7_00942	A1O7_06274	W9WHZ5	W9WK71	Uncharacterized protein.	G2/mitotic-specific cyclin 1/2; Belongs to the cyclin family.	0.519
A1O7_00942	A1O7_08559	W9WHZ5	W9VRI5	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.519
A1O7_01398	A1O7_00942	W9WAU2	W9WHZ5	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.444
A1O7_01398	A1O7_01786	W9WAU2	W9WKC7	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	RING-type domain-containing protein.	0.630
A1O7_01398	A1O7_02815	W9WAU2	W9WCV7	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.749
A1O7_01398	A1O7_07346	W9WAU2	W9VMS5	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.895
A1O7_01398	A1O7_10057	W9WAU2	W9VRC7	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein.	0.421
A1O7_01460	A1O7_03298	W9WJG9	W9W478	Uncharacterized protein.	Uncharacterized protein.	0.440
A1O7_01786	A1O7_01398	W9WKC7	W9WAU2	RING-type domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.630
A1O7_01786	A1O7_02815	W9WKC7	W9WCV7	RING-type domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.999
A1O7_01786	A1O7_06274	W9WKC7	W9WK71	RING-type domain-containing protein.	G2/mitotic-specific cyclin 1/2; Belongs to the cyclin family.	0.647
A1O7_01786	A1O7_07202	W9WKC7	W9VMW2	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.708
A1O7_01786	A1O7_08559	W9WKC7	W9VRI5	RING-type domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.647
A1O7_01786	A1O7_09479	W9WKC7	W9VEU2	RING-type domain-containing protein.	Uncharacterized protein.	0.673
A1O7_01786	A1O7_10029	W9WKC7	W9VGR7	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.673
A1O7_02815	A1O7_01398	W9WCV7	W9WAU2	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.749
A1O7_02815	A1O7_01786	W9WCV7	W9WKC7	CYCLIN domain-containing protein; Belongs to the cyclin family.	RING-type domain-containing protein.	0.999
A1O7_02815	A1O7_02827	W9WCV7	W9W2W1	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.441
A1O7_02815	A1O7_06274	W9WCV7	W9WK71	CYCLIN domain-containing protein; Belongs to the cyclin family.	G2/mitotic-specific cyclin 1/2; Belongs to the cyclin family.	0.754