(17 nodes) SCF ubiquitin ligase complex network (Cladophialophora yegresii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O7_00328	Cullin 1; Belongs to the cullin family. (754 aa)
	A1O7_09616	Uncharacterized protein. (963 aa)
	A1O7_09858	F-box and WD-40 domain-containing protein MET30. (681 aa)
	A1O7_09929	F-box and WD-40 domain-containing protein CDC4. (1037 aa)
	A1O7_07346	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (114 aa)
	A1O7_08393	WD_REPEATS_REGION domain-containing protein. (358 aa)
	A1O7_03025	RING-box protein 1. (123 aa)
	A1O7_06497	F-box and leucine-rich repeat protein GRR1. (377 aa)
	A1O7_04718	Uncharacterized protein. (568 aa)
	A1O7_00252	F-box domain-containing protein. (689 aa)
	A1O7_00498	F-box and WD-40 domain-containing protein CDC4. (591 aa)
	A1O7_02216	Uncharacterized protein. (964 aa)
	A1O7_02728	Ubiquitin-conjugating enzyme E2 R; Belongs to the ubiquitin-conjugating enzyme family. (258 aa)
	A1O7_00411	F-box domain-containing protein. (560 aa)
	A1O7_00726	Uncharacterized protein. (719 aa)
	A1O7_00747	Uncharacterized protein. (657 aa)
	A1O7_00014	F-box domain-containing protein. (732 aa)

Your Current Organism:

Cladophialophora yegresii

NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O7_00014	A1O7_00328	W9WZK2	W9W7Q7	F-box domain-containing protein.	Cullin 1; Belongs to the cullin family.	0.781
A1O7_00014	A1O7_03025	W9WZK2	W9W3F1	F-box domain-containing protein.	RING-box protein 1.	0.661
A1O7_00252	A1O7_00328	W9W752	W9W7Q7	F-box domain-containing protein.	Cullin 1; Belongs to the cullin family.	0.411
A1O7_00328	A1O7_00014	W9W7Q7	W9WZK2	Cullin 1; Belongs to the cullin family.	F-box domain-containing protein.	0.781
A1O7_00328	A1O7_00252	W9W7Q7	W9W752	Cullin 1; Belongs to the cullin family.	F-box domain-containing protein.	0.411
A1O7_00328	A1O7_00411	W9W7Q7	W9WGF3	Cullin 1; Belongs to the cullin family.	F-box domain-containing protein.	0.911
A1O7_00328	A1O7_00498	W9W7Q7	W9W7T9	Cullin 1; Belongs to the cullin family.	F-box and WD-40 domain-containing protein CDC4.	0.918
A1O7_00328	A1O7_00726	W9W7Q7	W9WHE4	Cullin 1; Belongs to the cullin family.	Uncharacterized protein.	0.925
A1O7_00328	A1O7_02216	W9W7Q7	W9WB64	Cullin 1; Belongs to the cullin family.	Uncharacterized protein.	0.921
A1O7_00328	A1O7_02728	W9W7Q7	W9WBB2	Cullin 1; Belongs to the cullin family.	Ubiquitin-conjugating enzyme E2 R; Belongs to the ubiquitin-conjugating enzyme family.	0.944
A1O7_00328	A1O7_03025	W9W7Q7	W9W3F1	Cullin 1; Belongs to the cullin family.	RING-box protein 1.	0.988
A1O7_00328	A1O7_06497	W9W7Q7	W9W3F2	Cullin 1; Belongs to the cullin family.	F-box and leucine-rich repeat protein GRR1.	0.974
A1O7_00328	A1O7_07346	W9W7Q7	W9VMS5	Cullin 1; Belongs to the cullin family.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.842
A1O7_00328	A1O7_08393	W9W7Q7	W9VTH9	Cullin 1; Belongs to the cullin family.	WD_REPEATS_REGION domain-containing protein.	0.918
A1O7_00328	A1O7_09616	W9W7Q7	W9VFL1	Cullin 1; Belongs to the cullin family.	Uncharacterized protein.	0.925
A1O7_00328	A1O7_09858	W9W7Q7	W9VGB1	Cullin 1; Belongs to the cullin family.	F-box and WD-40 domain-containing protein MET30.	0.987
A1O7_00328	A1O7_09929	W9W7Q7	W9VGI0	Cullin 1; Belongs to the cullin family.	F-box and WD-40 domain-containing protein CDC4.	0.975
A1O7_00411	A1O7_00328	W9WGF3	W9W7Q7	F-box domain-containing protein.	Cullin 1; Belongs to the cullin family.	0.911
A1O7_00411	A1O7_02216	W9WGF3	W9WB64	F-box domain-containing protein.	Uncharacterized protein.	0.417
A1O7_00411	A1O7_03025	W9WGF3	W9W3F1	F-box domain-containing protein.	RING-box protein 1.	0.749