STRINGSTRING
A1O7_01690 A1O7_01690 A1O7_09334 A1O7_09334 A1O7_09285 A1O7_09285 A1O7_09370 A1O7_09370 A1O7_09530 A1O7_09530 A1O7_10023 A1O7_10023 A1O7_08057 A1O7_08057 A1O7_08183 A1O7_08183 A1O7_08853 A1O7_08853 A1O7_06782 A1O7_06782 A1O7_09810 A1O7_09810 NAT10 NAT10 A1O7_07850 A1O7_07850 A1O7_07675 A1O7_07675 A1O7_10161 A1O7_10161 A1O7_07890 A1O7_07890 A1O7_07821 A1O7_07821 A1O7_09413 A1O7_09413 A1O7_08000 A1O7_08000 A1O7_08080 A1O7_08080 A1O7_05381 A1O7_05381 A1O7_05747 A1O7_05747 A1O7_05812 A1O7_05812 A1O7_06177 A1O7_06177 A1O7_08293 A1O7_08293 A1O7_06398 A1O7_06398 A1O7_06278 A1O7_06278 A1O7_08721 A1O7_08721 A1O7_08802 A1O7_08802 A1O7_08852 A1O7_08852 A1O7_03843 A1O7_03843 SPB1 SPB1 A1O7_03749 A1O7_03749 A1O7_04095 A1O7_04095 A1O7_04055 A1O7_04055 A1O7_04270 A1O7_04270 A1O7_04620 A1O7_04620 A1O7_04515 A1O7_04515 A1O7_04656 A1O7_04656 A1O7_04906 A1O7_04906 A1O7_07668 A1O7_07668 A1O7_05220 A1O7_05220 A1O7_05393 A1O7_05393 A1O7_05408 A1O7_05408 A1O7_05221 A1O7_05221 A1O7_05982 A1O7_05982 A1O7_05616 A1O7_05616 A1O7_02500 A1O7_02500 A1O7_02600 A1O7_02600 A1O7_06058 A1O7_06058 A1O7_02675 A1O7_02675 A1O7_06477 A1O7_06477 A1O7_09135 A1O7_09135 A1O7_09235 A1O7_09235 A1O7_04195 A1O7_04195 A1O7_09688 A1O7_09688 A1O7_00996 A1O7_00996 A1O7_08628 A1O7_08628 A1O7_02155 A1O7_02155 NOP7 NOP7 A1O7_01694 A1O7_01694 A1O7_03049 A1O7_03049 A1O7_03585 A1O7_03585 A1O7_03195 A1O7_03195 A1O7_07504 A1O7_07504 A1O7_00050 A1O7_00050 A1O7_05654 A1O7_05654 A1O7_01239 A1O7_01239 A1O7_00943 A1O7_00943 A1O7_01054 A1O7_01054 A1O7_01455 A1O7_01455 A1O7_01335 A1O7_01335 YTM1 YTM1 A1O7_01416 A1O7_01416 A1O7_01836 A1O7_01836 A1O7_06415 A1O7_06415 A1O7_05277 A1O7_05277 A1O7_01962 A1O7_01962 A1O7_02632 A1O7_02632 A1O7_02942 A1O7_02942 ERB1 ERB1 A1O7_00815 A1O7_00815 A1O7_00916 A1O7_00916 A1O7_00997 A1O7_00997
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O7_01690WD_REPEATS_REGION domain-containing protein. (993 aa)
A1O7_09334DRIM domain-containing protein. (2589 aa)
A1O7_09285NUC153 domain-containing protein. (725 aa)
A1O7_09370Ribosome biogenesis protein n. (261 aa)
A1O7_09530WD_REPEATS_REGION domain-containing protein. (557 aa)
A1O7_10023Bms1-type G domain-containing protein. (832 aa)
A1O7_08057U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (281 aa)
A1O7_08183RNA helicase. (855 aa)
A1O7_08853Uncharacterized protein. (269 aa)
A1O7_06782S4 RNA-binding domain-containing protein. (188 aa)
A1O7_09810rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (402 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1137 aa)
A1O7_07850Uncharacterized protein. (388 aa)
A1O7_07675Nop domain-containing protein. (667 aa)
A1O7_10161Uncharacterized protein. (382 aa)
A1O7_07890ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (472 aa)
A1O7_07821WD_REPEATS_REGION domain-containing protein. (398 aa)
A1O7_09413Uncharacterized protein. (942 aa)
A1O7_08000Sas10 domain-containing protein. (576 aa)
A1O7_08080Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A1O7_0538118S rRNA biogenesis protein RCL1. (407 aa)
A1O7_05747WD_REPEATS_REGION domain-containing protein. (963 aa)
A1O7_05812Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (661 aa)
A1O7_06177Uncharacterized protein. (767 aa)
A1O7_08293Uncharacterized protein. (326 aa)
A1O7_06398Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (313 aa)
A1O7_06278U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (713 aa)
A1O7_08721Atypical/RIO/RIO2 protein kinase. (377 aa)
A1O7_08802Uncharacterized protein. (1812 aa)
A1O7_08852Uncharacterized protein. (352 aa)
A1O7_03843Uncharacterized protein. (365 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (838 aa)
A1O7_03749Uncharacterized protein. (392 aa)
A1O7_04095HMG box domain-containing protein. (316 aa)
A1O7_04055U3 small nucleolar RNA-associated protein 22. (1152 aa)
A1O7_04270C2H2-type domain-containing protein. (122 aa)
A1O7_04620WD_REPEATS_REGION domain-containing protein. (888 aa)
A1O7_04515WD_REPEATS_REGION domain-containing protein. (533 aa)
A1O7_0465620S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (437 aa)
A1O7_04906Uncharacterized protein. (277 aa)
A1O7_07668Brix domain-containing protein. (456 aa)
A1O7_05220Brix domain-containing protein. (337 aa)
A1O7_05393KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (339 aa)
A1O7_05408Nop domain-containing protein. (517 aa)
A1O7_05221Uncharacterized protein. (347 aa)
A1O7_05982PUM-HD domain-containing protein. (696 aa)
A1O7_05616Uncharacterized protein. (523 aa)
A1O7_02500WD_REPEATS_REGION domain-containing protein. (1107 aa)
A1O7_02600CP-type G domain-containing protein. (547 aa)
A1O7_06058Kri1_C domain-containing protein. (609 aa)
A1O7_02675Uncharacterized protein. (757 aa)
A1O7_06477Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (483 aa)
A1O7_09135WD_REPEATS_REGION domain-containing protein. (589 aa)
A1O7_09235BUD22 domain-containing protein. (440 aa)
A1O7_04195HAD_SAK_1 domain-containing protein. (566 aa)
A1O7_09688CBF domain-containing protein. (287 aa)
A1O7_00996Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (702 aa)
A1O7_08628Uncharacterized protein. (385 aa)
A1O7_02155Uncharacterized protein. (707 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (675 aa)
A1O7_01694WD_REPEATS_REGION domain-containing protein. (593 aa)
A1O7_03049Uncharacterized protein. (478 aa)
A1O7_03585Brix domain-containing protein. (439 aa)
A1O7_03195Protein MAK16; Belongs to the MAK16 family. (325 aa)
A1O7_07504Uncharacterized protein. (927 aa)
A1O7_0005040S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (267 aa)
A1O7_05654Uncharacterized protein. (1030 aa)
A1O7_01239Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (590 aa)
A1O7_00943Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4860 aa)
A1O7_0105440S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
A1O7_01455rRNA-processing protein FCF1. (185 aa)
A1O7_0133540S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (261 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (463 aa)
A1O7_01416WD_REPEATS_REGION domain-containing protein. (1064 aa)
A1O7_01836Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (256 aa)
A1O7_06415Uncharacterized protein. (202 aa)
A1O7_05277Brix domain-containing protein. (296 aa)
A1O7_01962Uncharacterized protein. (296 aa)
A1O7_02632Uncharacterized protein. (366 aa)
A1O7_02942Uncharacterized protein. (1251 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (780 aa)
A1O7_00815Bms1-type G domain-containing protein. (1177 aa)
A1O7_00916Uncharacterized protein; Belongs to the DEAD box helicase family. (795 aa)
A1O7_0099760S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (189 aa)
Your Current Organism:
Cladophialophora yegresii
NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405
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