14 items (Cladophialophora yegresii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O7_01472	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (422 aa)
	A1O7_00853	Uncharacterized protein. (472 aa)
	A1O7_09892	Uncharacterized protein. (691 aa)
	A1O7_05717	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (389 aa)
	A1O7_08464	Prefoldin, alpha subunit. (182 aa)
	A1O7_04141	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (701 aa)
	A1O7_04670	CMGC/CDK/CRK7 protein kinase. (710 aa)
	A1O7_06230	Uncharacterized protein. (400 aa)
	A1O7_05871	CDC73_C domain-containing protein. (444 aa)
	A1O7_03746	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1424 aa)
	A1O7_03257	CMGC/CDK protein kinase. (634 aa)
	A1O7_03981	Plus3 domain-containing protein. (625 aa)
	A1O7_01556	26S protease subunit rpt4; Belongs to the AAA ATPase family. (393 aa)
	A1O7_02819	Uncharacterized protein. (311 aa)

Your Current Organism:

Cladophialophora yegresii

NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O7_00853	A1O7_02819	W9W8R7	W9WBN0	Uncharacterized protein.	Uncharacterized protein.	0.844
A1O7_00853	A1O7_03257	W9W8R7	W9W435	Uncharacterized protein.	CMGC/CDK protein kinase.	0.729
A1O7_00853	A1O7_03746	W9W8R7	W9W3M0	Uncharacterized protein.	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	0.852
A1O7_00853	A1O7_03981	W9W8R7	W9WN61	Uncharacterized protein.	Plus3 domain-containing protein.	0.996
A1O7_00853	A1O7_04141	W9W8R7	W9VWF0	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.624
A1O7_00853	A1O7_04670	W9W8R7	W9VXE8	Uncharacterized protein.	CMGC/CDK/CRK7 protein kinase.	0.582
A1O7_00853	A1O7_05871	W9W8R7	W9W1R4	Uncharacterized protein.	CDC73_C domain-containing protein.	0.999
A1O7_01472	A1O7_03257	W9WAI5	W9W435	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	CMGC/CDK protein kinase.	0.888
A1O7_01472	A1O7_04141	W9WAI5	W9VWF0	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.823
A1O7_01472	A1O7_04670	W9WAI5	W9VXE8	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	CMGC/CDK/CRK7 protein kinase.	0.833
A1O7_01472	A1O7_09892	W9WAI5	W9VQW1	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.879
A1O7_01556	A1O7_04141	W9WJP9	W9VWF0	26S protease subunit rpt4; Belongs to the AAA ATPase family.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.545
A1O7_01556	A1O7_05717	W9WJP9	W9VRE7	26S protease subunit rpt4; Belongs to the AAA ATPase family.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.999
A1O7_02819	A1O7_00853	W9WBN0	W9W8R7	Uncharacterized protein.	Uncharacterized protein.	0.844
A1O7_02819	A1O7_03257	W9WBN0	W9W435	Uncharacterized protein.	CMGC/CDK protein kinase.	0.425
A1O7_02819	A1O7_03981	W9WBN0	W9WN61	Uncharacterized protein.	Plus3 domain-containing protein.	0.848
A1O7_02819	A1O7_04141	W9WBN0	W9VWF0	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.491
A1O7_02819	A1O7_04670	W9WBN0	W9VXE8	Uncharacterized protein.	CMGC/CDK/CRK7 protein kinase.	0.425
A1O7_02819	A1O7_05871	W9WBN0	W9W1R4	Uncharacterized protein.	CDC73_C domain-containing protein.	0.856
A1O7_03257	A1O7_00853	W9W435	W9W8R7	CMGC/CDK protein kinase.	Uncharacterized protein.	0.729