5 items (Cladophialophora yegresii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O7_04483	Uncharacterized protein. (1447 aa)
	A1O7_02021	Hist_deacetyl domain-containing protein. (364 aa)
	A1O7_02670	Uncharacterized protein. (412 aa)
	A1O7_09250	Uncharacterized protein. (1380 aa)
	A1O7_01583	Uncharacterized protein. (617 aa)

Your Current Organism:

Cladophialophora yegresii

NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O7_01583	A1O7_02670	W9WAV6	W9W2E7	Uncharacterized protein.	Uncharacterized protein.	0.875
A1O7_02021	A1O7_04483	W9W0X2	W9W736	Hist_deacetyl domain-containing protein.	Uncharacterized protein.	0.674
A1O7_02021	A1O7_09250	W9W0X2	W9W5S3	Hist_deacetyl domain-containing protein.	Uncharacterized protein.	0.484
A1O7_02670	A1O7_01583	W9W2E7	W9WAV6	Uncharacterized protein.	Uncharacterized protein.	0.875
A1O7_04483	A1O7_02021	W9W736	W9W0X2	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.674
A1O7_04483	A1O7_09250	W9W736	W9W5S3	Uncharacterized protein.	Uncharacterized protein.	0.551
A1O7_09250	A1O7_02021	W9W5S3	W9W0X2	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.484
A1O7_09250	A1O7_04483	W9W5S3	W9W736	Uncharacterized protein.	Uncharacterized protein.	0.551